KEGG   Granulicella sp. WH15: FTO74_13430
Entry
FTO74_13430       CDS       T06415                                 
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
  KO
K03092  RNA polymerase sigma-54 factor
Organism
grw  Granulicella sp. WH15
Pathway
grw02020  Two-component system
grw02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:grw00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    FTO74_13430 (rpoN)
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    FTO74_13430 (rpoN)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:grw03021]
    FTO74_13430 (rpoN)
Transcription machinery [BR:grw03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     FTO74_13430 (rpoN)
SSDB
Motif
Pfam: Sigma54_DBD Sigma54_CBD Sigma54_AID HTH_3 LacI HTH_IclR Fe_dep_repress Arg_repressor HTH_23 DNA_pol3_delta_C HTH_38 Lyase_1 HTH_Tnp_ISL3 HTH_Crp_2 RNA_pol_Rpb1_7
Other DBs
NCBI-ProteinID: QHN04250
UniProt: A0A7L5AC76
Position
complement(3241897..3243582)
AA seq 561 aa
MFMQPRLNLKVSQRQVLTPGLVQMVSVLALNKLDLKEMINSEMVENPVLEELEEFGPTME
EMDGREGDRDRSVAEVAAETERVEKDPFDEIDFGSYFQEFLDPGFKTTSNFEEYDKPSFE
HFLAQPSTLSDHLLWQIGAQTLSPVLRAAVELVIGNLDGNGYLTASDEELAEALAAEVHG
PIRLDPIPFERGARAKPELAEEEEVLDSVAAAAPKPKSLDAELVIIVRARELVNQLDPLG
VGARDLRECLLVQIAAQRREAETVAARRRELASAEAEEGLEELTDEVAPPQSRFDVFETA
AHIVTNCLPLLLKKDMRELTKSCGRTAEEVQAAVEYIRTLDPRPGQRYAQNDTRLIEPDV
AFVKRDDQYVVLMNEEDMPTLRLNQGYRKMLRQKQTDKDVREYVKERYKSAIQLLRNIEQ
RKNTIVRTCEVIVRRQQEFLEHGEQSLKPMMIKEVAEEIGVHPSTVSRAVANKYVHTSQG
VYELRFFFSEGVNGPEGGDLPLVLLKRKVKKLIEEEDPRKPLTDDQLAAQLKSEGINVTR
RTVAKYREDQQIPSTHQRRVR
NT seq 1686 nt   +upstreamnt  +downstreamnt
ttgttcatgcaacccagactgaatctgaaggtctcgcaacgccaggtgctgacgcccggc
cttgtgcagatggtcagtgtgctggcgctgaacaagctggacctgaaggagatgatcaac
tccgagatggtggagaaccccgtgctcgaggagctggaggagttcggacccaccatggag
gagatggatgggcgcgagggtgaccgcgaccgctccgtcgccgaggtggcggcggagacc
gaacgggtggagaaggaccccttcgacgagatcgacttcggcagctactttcaggagttt
ctggaccccggcttcaagacgacctcgaacttcgaggagtatgacaagccctcgtttgaa
cactttctggcccagcccagcacgctgagcgaccatctgctgtggcagatcggggcgcag
acgctgtcgccggtgctgcgtgcggcggtggagctggtgatcggcaacctggacgggaac
ggctacctgacggcgagcgacgaggagctggccgaggccctggcggccgaggtgcatggt
ccgatccggctggacccgattccgtttgagcgtggggcgcgggctaagccggaactggct
gaggaggaagaggtgctcgactcggtggcagccgctgctcctaagccgaagtctctggat
gcggagctggtcattatcgtccgcgcgcgggagctggtgaaccagcttgatcccctgggg
gtcggcgcgcgcgacctgcgcgagtgcctgctggtgcagattgcggcgcagcggcgcgag
gccgagacggtggcggcgcggcgcagggagctggcgtcggcagaggcggaagagggtctg
gaggagcttacggatgaggtggctccgccgcagagccgcttcgacgtcttcgagacggcg
gcgcatattgtgacgaactgcctgccgctgctgctgaagaaggacatgcgtgagctgacc
aagagctgcgggcgcacggccgaggaggtgcaggccgcggtggagtacatccgcacgctg
gaccccaggccggggcagcggtacgcgcagaacgatacgcggctgatcgagccggatgtg
gcgttcgtgaagcgcgacgaccagtacgtcgtgctgatgaacgaggaggacatgcccacg
ctgcgactgaaccagggctatcggaagatgctgcggcagaaacagacggacaaggacgtc
cgcgagtatgtgaaggagcggtacaagtcggcgatccagcttctcagaaacatcgagcag
cggaagaacacgattgtgcggacctgcgaggtgatcgtcaggcggcagcaggagttcctg
gagcatggggagcagtcgctgaagccgatgatgattaaggaagtggccgaggagatcgga
gtgcacccttcgacggtgagccgcgcggtggcgaacaagtatgtgcacacgtcgcagggg
gtgtatgagctgcggttcttcttctcggagggcgtgaacggccctgagggcggcgacctg
ccgttggtgctgctgaagcgaaaggtgaagaagctgatcgaagaggaagacccgcgcaag
ccgctgaccgacgaccagttggccgcgcaactcaagtccgaggggatcaatgtgactcgg
cggacggtggcgaagtacagggaagaccagcagattccaagcactcaccagcgtcgcgtt
cgataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (15)   
   Pfam (15)   
All databases (23)   

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