KEGG   Glycine soja (wild soybean): 114388310
Entry
114388310         CDS       T06057                                 
Name
(RefSeq) flowering time control protein FY-like isoform X1
  KO
K15542  polyadenylation factor subunit 2
Organism
gsj  Glycine soja (wild soybean)
Pathway
gsj03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:gsj00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    114388310
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gsj03019]
    114388310
Messenger RNA biogenesis [BR:gsj03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     114388310
SSDB
Motif
Pfam: WD40 ANAPC4_WD40 eIF2A NBCH_WD40 WD40_like WDR54 PROPPIN
Other DBs
NCBI-GeneID: 114388310
NCBI-ProteinID: XP_028204528
Position
15:complement(44372488..44393430)
AA seq 711 aa
MMYNDQQHQHQQHQYQQQQQQPFHQPPGPEFHRGPPPPSHPPPMMRQGSASSTNLAPEFH
HPGPGGPPPPHYDAHSDSHGAKRIRKLTQRKAVDYTSTVVRYMQIRMSQRDSRDRTVLQP
TPAAAIDMLPAVGYPDNPSTSFAAKFVHTSLNKNRCPINRVLWTPTGRRLITGSQTGEFT
LWNGQSFNFEMILQAHDQAIRSMVWSHNDNWMVSGDDGGAIKYWQNNMNNVKANKSAHKE
SVRDLSFCRTDLKFCSCSDDTTVKVWDFARCQEECSLSGHGWDVKSVDWHPTKSLLVSGG
KDNLVKLWDAKTGRELCSFHGHKNTVLCVKWNQNGNWVLTASKDQIIKLYDIRAMKELES
FRGHRKDVTTLAWHPFHEEYFVSGSYDGSIFHWLVGHETPQIEISNAHDNNVWDLAWHPI
GYLLCSGSSDHTTKFWCRNRPGDPARDRFNTGMPGYADQNPVVGRMGGNFTIAEGPTTPG
PFAPGLTRNEGTIPGVGVAMPLSIPSLDMPQGEQKQPHPVSMGAPPLPPGPHPSLLNANQ
QQPYQQNPQQIPQHQHQALPQQMGPLPMPPNMQQLQHPSHSPFPNMPRPPPQMPIGMPGS
IPGISSVPTSHPMPMPGPMGMQGAMNQMGTPMPQGPYVGMNQMHSGSLPTSGGPPLGGFP
GNLPNMQGPSNANYPQGASFNRPQGGQMPLMQGYSPYQSGNQSGMPPNAQP
NT seq 2136 nt   +upstreamnt  +downstreamnt
atgatgtacaatgatcagcagcatcagcaccagcagcaccagtaccagcaacaacagcag
cagcctttccaccagccgccgggtccggagttccaccgcggaccgccgccgccgtcgcat
ccgccgccgatgatgcggcaaggctccgcctcgtcgacgaacctcgcccccgagtttcac
catcccggccccggagggcccccgcctcctcattacgatgctcacagtgatagccatggt
gcaaaaagaatacgaaagcttactcaaaggaaagcagttgattatacaagcacagttgtg
cgttatatgcagattcgtatgtcgcagcgggattcaagggataggactgtactgcaaccc
accccggcagcagcaattgatatgttgccagcagttggctatccagacaatccatccaca
agctttgctgctaaatttgttcatacatctctaaataaaaatcgttgccccattaatcgc
gttctttggactccaacaggccggcgacttattactggttcacagactggggaatttact
ctttggaatggacaatcttttaattttgaaatgattcttcaggcgcatgatcaagcaatc
agatccatggtctggagtcacaatgacaattggatggtctctggtgatgatggaggcgca
ataaagtattggcagaacaacatgaacaatgttaaagccaacaaatctgctcataaagaa
tcagtccgtgatttaagtttctgtaggacagatttgaagttctgttcatgctctgatgat
accacagttaaagtttgggattttgcacgctgtcaagaagagtgttcattatctggccat
ggttgggatgtgaagagtgttgactggcatcctacaaaatctctattagtatcaggtggg
aaggacaatctagtgaaactttgggatgctaaaacagggagagagctttgttcatttcat
ggccacaaaaacactgtgctgtgtgtaaaatggaatcaaaatggcaactgggtgttaacg
gcttcaaaggatcaaataataaagctttatgacataagagcaatgaaggaacttgaatcg
ttccgtgggcatcgcaaggatgttactactttggcatggcatccgttccatgaagagtac
tttgtcagtgggagttatgatggttccatcttccattggcttgttgggcatgaaactcca
caaattgaaatttccaatgctcatgataataatgtgtgggatcttgcatggcatcctatt
ggataccttctgtgcagtggcagcagtgatcatacaacaaagttttggtgcagaaatagg
ccaggagaccctgcccgtgatagatttaacactggcatgccaggatatgctgaccaaaat
cctgttgttggtcggatgggtggtaattttacaatagctgaaggcccaacaactccagga
ccatttgcccctgggttgactcgaaatgagggtaccattccaggtgttggagttgcaatg
cccttatctattccttctcttgacatgcctcaaggggagcagaagcaaccccatcctgtt
tcaatgggtgctcctcctcttccccccggtccacatccctcccttcttaatgccaaccaa
cagcaaccataccaacagaatcctcagcagatcccacaacatcaacaccaggctctacca
caacagatgggtcctttgcctatgcctccaaatatgcaacaactacagcacccttcccat
tctcccttccctaatatgcctcgccctccaccccaaatgcctattggcatgccaggatct
ataccagggatttcatcagtgcctacatcacatccaatgccaatgccaggtccaatggga
atgcaaggggcgatgaatcagatgggtactccaatgccacaaggtccttatgtaggcatg
aatcaaatgcattcaggatccttgcctacaagtggagggccacctcttggtggttttcca
ggcaacttgccaaatatgcaagggccatcaaatgccaattatcctcaaggtgcttcattt
aacagacctcaaggtggccaaatgcctctgatgcaagggtatagtccttaccagtctggt
aatcaatctgggatgcctccaaacgcacaaccatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (7)   
   Pfam (7)   
All databases (18)   

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