KEGG   Geovibrio thiophilus: EP073_00750
Entry
EP073_00750       CDS       T05803                                 
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
  KO
K14441  ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
Organism
gtl  Geovibrio thiophilus
Brite
KEGG Orthology (KO) [BR:gtl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:gtl03009]
    EP073_00750 (rimO)
Enzymes [BR:gtl01000]
 2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.4  Transferring alkylthio groups
    2.8.4.4  [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
     EP073_00750 (rimO)
Ribosome biogenesis [BR:gtl03009]
 Prokaryotic type
  ribosomal protein modification factors
   EP073_00750 (rimO)
SSDB
Motif
Pfam: Radical_SAM UPF0004 TRAM_2 DUF2179 CLP1_P
Other DBs
NCBI-ProteinID: QAR31979
UniProt: A0A410JVC8
Position
161880..163187
AA seq 435 aa
MKISYISLGCSKNKVDLEYLMGSLQEGGHEISLEMADADAIIINTCGFIEPAVNEAVEAV
LEAAQVKKPDAKLIVTGCMTERFKNDVAGELPEIDFHTGVGKMSDVIAYLEGVEPVRKER
DFLYGGARVLTGVPFSAYIKISEGCNNRCTYCTIPSIRGNLTGRRIEDIVNEITALKDQG
VKEFVLVSQDNTKYGTDIYKKPMLCRLLREIDKIGGDFYVRIMYLNPDGVTEELVKLVKN
SEKILSYYDIPVQHINKRVLKDMHRKSTPDGIKHVFSMIREIDPEAFIRTTMIVGFPGET
DEEFAELLEFVKEYKPDYAGFFPFYPEEGTKATAMGMRVDGRTVRGRIGALRKAQIKNTR
ERLKKVKKNDIICFAEKPNDEFGFLMEGRALFQAPEVDGKVLFTDSEAISGYGPYVCRIE
KISYPDIVCEVIRPL
NT seq 1308 nt   +upstreamnt  +downstreamnt
atgaagatttcttacataagtttaggatgctcaaaaaacaaagtcgatcttgagtatctc
atgggttcgcttcaggaaggcgggcatgagataagccttgagatggccgacgcggacgcg
ataataatcaacacatgcggatttattgaacctgcggtgaacgaggctgtggaggctgtg
cttgaggcggcgcaggtgaaaaagcctgatgcgaagctgatagtcaccggctgcatgaca
gagagattcaagaacgatgtggcaggcgagctgccggagatagattttcatacgggcgta
ggcaaaatgagcgatgtcatagcctatctggaaggggtcgagcctgtgaggaaggagcgt
gatttcctttacggcggcgcgcgcgtactcaccggagtgcccttcagcgcatacatcaaa
atatccgaagggtgcaacaaccgctgcacatactgcaccatcccctccatcagaggaaac
cttaccggaaggcgcattgaggacatagtgaacgagataaccgccctgaaggatcaggga
gtcaaggagtttgtgcttgtttctcaggataataccaaatacggaacagatatttacaaa
aagccgatgctttgcaggcttctgcgggagatagataaaatcgggggcgacttctacgtg
aggatcatgtacctcaaccccgacggagtgacggaggaacttgtaaaactcgtcaaaaac
tcagagaagattctaagctactacgatattccggttcagcacatcaataaacgtgtgctg
aaggatatgcacaggaaatccacaccggacggcataaaacatgttttcagcatgataagg
gaaatcgatcctgaagcgttcatccgtacgacaatgatagtcggcttccccggggaaaca
gatgaggagttcgcagaactccttgaatttgtgaaggagtacaagccggattatgcaggc
ttcttcccgttctaccccgaggaaggcacaaaagccaccgcgatgggcatgagggtggac
ggcaggacggttcggggaaggatcggcgcgctccgtaaggcgcagataaaaaacacccgt
gaacgcttgaaaaaagttaagaaaaatgacatcatctgctttgccgaaaagcctaacgat
gagttcgggtttctgatggaaggaagagccctgtttcaggctccggaggtggacgggaaa
gtcctcttcaccgattccgaagcgatcagcggctatggtccgtatgtctgccggatagaa
aaaataagctatccggatatagtgtgcgaggtcataagaccgctttaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (9)   
   KEGG COMPOUND (9)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (23)   

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