KEGG   Geobacillus thermodenitrificans: GTNG_2494
Entry
GTNG_2494         CDS       T00496                                 
Name
(GenBank) Exodeoxyribonuclease V alpha chain
  KO
K03581  exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
Organism
gtn  Geobacillus thermodenitrificans
Pathway
gtn03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:gtn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    GTNG_2494
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:gtn03400]
    GTNG_2494
Enzymes [BR:gtn01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     GTNG_2494
DNA repair and recombination proteins [BR:gtn03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     GTNG_2494
SSDB
Motif
Pfam: AAA_30 AAA_19 HHH_4 SH3_13 UvrD_C_2 Viral_helicase1 AAA_11 HHH_5 UvrD-helicase AAA_16 Zeta_toxin AAA_22 T2SSE AAA_12 HTH_IclR UvrD_C AAA_28 TsaE AAA_18 AAA DUF4926 NTPase_1 AAA_23 nSTAND3 AAA_17
Other DBs
NCBI-ProteinID: ABO67839
UniProt: A4IR85
Position
complement(2595629..2597992)
AA seq 787 aa
MQEQQSLALDGRTFIKGVCLAVIFHNEETLYTVVRIRVEETNEAAAEEEVVVTGYFPRLN
EGDVYIFYGQFRQHPRFGRQYAAEQFRKQLPNTKEGVIDYLSSGLFKGIGKKTATAIVDA
LGENAIAAILRDPGALERVPKLTKQKAKQLYETLCAHEGLEQTMIALAQLGFGPQLAMKI
YQVYGEETMDIIHENPYKLVEDIEGIGFGRADELGRQLGISGSHPARLRAACLFVLEQAC
LQEGHVYMKKEELVSRIGELLGGRSNGAVDGQAIEQTLLMLSEEGKMIAEQGRYYLPSLY
FAEKGIASNIRRLLGQTPPSASFPESEFLLALGALEERLGMQYAPQQKEAIQRALSSPLF
ILTGGPGTGKTTVIKGIVELFAVLNGISLSPDDYKNGEPFPVLLAAPTGRAAKRMSEATG
LPAATIHRLLGWNGAEGFSHDENEPIAGKLLVVDEVSMVDTWLANHLLKAVPNGMQVIFV
GDEDQLPSVGPGQVLKDLLESGVIPSVRLTEVYRQAEGSSIIELAHEMKRGNVPADLTAP
KADRSFIRCRAGQVASVVRQIAENARNKGFSVKDIQVLAPMYRGPAGIDQLNKVLQELFN
PPTDGKRELSVGDVVYRVGDKVLQLVNQPEDNVFNGDIGEVVAIFYAKENTEKQDLLVVS
FDGIEVTYTRQDLAQITHAYCCSVHKAQGSEFPIVILPVVKSYYRMLKRNLLYTAVTRSK
QFLILCGEEEAFRFGVAQRGDGARQTALAEKLAASTALFVEGELPLEDANIGMENVTPYD
FMDDGSS
NT seq 2364 nt   +upstreamnt  +downstreamnt
ttgcaagagcagcaatcgcttgcgctggacggccgcacgtttattaaaggggtgtgtttg
gccgtcatttttcataacgaggagacgttgtataccgttgtccgtatccgcgtcgaagaa
acgaatgaagcggctgcggaggaagaagtggtcgtcaccggctattttccacgtttaaat
gaaggggacgtgtacatcttttacgggcaattccgccaacatccgcgctttggccgccag
tatgcggccgagcagttccgcaaacagcttccgaacacgaaagaaggagtcatcgattat
ttgtcgagcggcttgtttaaggggatcggcaaaaaaacagcgacagcgattgtcgatgcg
cttggtgaaaacgcgatcgccgccattttgcgtgatccaggagcgctcgaacgcgtgccc
aagctgacgaaacaaaaagcgaagcaattgtacgaaacgctctgcgcccacgaagggctc
gaacagacgatgatcgccctcgctcagctcggttttggtccacagctggcaatgaaaatt
taccaagtatacggcgaagagacaatggacatcattcatgaaaacccgtacaagctcgtc
gaagatattgaagggatcggttttggtcgcgccgatgagctcgggcggcagctcggcatt
tccggcagtcatccagcccggctgcgcgccgcttgtctgtttgtccttgagcaggcatgc
ttgcaagaagggcacgtctacatgaagaaagaagagctcgtcagccgcattggggagctg
cttggcggaaggtcgaacggagcggttgatggacaagccatcgaacagacgctccttatg
ttaagcgaagaaggaaagatgatcgcggaacaaggccgctattatcttccttcgctttac
ttcgccgaaaaagggatcgcttctaacattcggcggttgctcgggcaaacgccaccatcg
gcctcatttccggagtcggagtttttgctggcgctcggggcgcttgaagaacgactcggg
atgcaatatgctccgcagcaaaaagaagcgattcaacgggcgctgtcttcgccgctcttt
attttgacgggaggtccaggaacaggaaaaacaacggtcattaaaggaattgttgagctg
tttgcggttctaaatggcatatcactttcccccgacgattacaaaaacggtgaaccgttt
cctgtgctgctcgctgctccgactggacgggctgcaaagcggatgagtgaggcgaccggg
ctgccggcggcgacgattcaccggctgctcggctggaatggagcggaagggttcagccac
gatgaaaatgagccgattgccggtaagctgcttgtcgtcgatgaggtgtcgatggtcgat
acgtggttggctaatcacctgttaaaagcggtgcctaatgggatgcaagtcatcttcgtt
ggcgatgaagaccagcttccatccgtcgggccagggcaagtgttgaaagatttgctcgag
tcgggtgttatcccgtccgtgcggctgaccgaggtgtaccgccaggcggaagggtcatcg
attatcgagctcgcccatgagatgaagcgtggaaacgtgccggccgacttgactgccccg
aaggcggatcgttcgttcatccgctgccgcgccggacaagtggctagtgtcgtgcgtcaa
atcgccgaaaatgcgcgtaacaaagggttttccgtcaaagacattcaagtgctcgctccg
atgtaccgcggcccagccggtatcgatcagctaaacaaagtgctgcaggagctgtttaat
ccaccaacggatgggaagcgagaactttccgttggcgacgtagtgtatcgcgtcggcgat
aaagtgctccagctcgtcaatcaaccggaagacaacgtgtttaacggcgatatcggtgaa
gtcgtggccattttttatgccaaagaaaatacagaaaagcaagatttgctcgtcgtctca
tttgacggcattgaagtgacgtatacaaggcaagatttagcgcaaattacccatgcatat
tgctgctccgtccataaggcgcaagggagcgagtttccgattgtcattttgcctgttgtc
aaaagttattaccggatgttgaagcggaatttgttgtatacggcggtgacaagaagcaaa
caatttctgattttatgcggggaggaagaagcattccggtttggtgttgcccagcggggc
gacggagcgcgccagacggcgcttgcagaaaagttggcggcttcgactgcgctgtttgtc
gaaggggaactgccgcttgaggatgcgaacatcgggatggaaaacgttacgccgtatgac
tttatggacgatgggtcaagctaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (25)   
   Pfam (25)   
All databases (35)   

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