KEGG   Gardnerella vaginalis HMP9231: HMPREF9231_1087
Entry
HMPREF9231_1087   CDS       T01939                                 
Symbol
murF
Name
(GenBank) UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase
  KO
K01929  UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
Organism
gvh  Gardnerella vaginalis HMP9231
Pathway
gvh00300  Lysine biosynthesis
gvh00550  Peptidoglycan biosynthesis
gvh01100  Metabolic pathways
gvh01502  Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:gvh00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    HMPREF9231_1087 (murF)
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    HMPREF9231_1087 (murF)
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01502 Vancomycin resistance
    HMPREF9231_1087 (murF)
Enzymes [BR:gvh01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.10  UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
     HMPREF9231_1087 (murF)
SSDB
Motif
Pfam: Mur_ligase_M Mur_ligase Mur_ligase_C CoV_S1 CbiA
Other DBs
NCBI-ProteinID: AEF31549
Position
complement(1312638..1314368)
AA seq 576 aa
MQNKTLGNNTTTNNMRMMPMSVKEVAAAVNGRLFIGGCLVKENHSITSEKFCITDNDVVI
SDNDVVIYATSDSRKVVDSSIFVAIPGDRVDGHDFVQKAAELGAKIAIVEHFVKLDESNN
SKIAQIVVENSVEALGLLAKHNLERRRALNTPFSIIGITGSVGKTTTKDMLKALLSTLGN
TVAPIGSFNNEIGLPLTSLQVNENTRFLIAEMGANHVGEIAKLTTIAPPDLAVVLKVGVA
HLGEFGSVERIAQAKSEIVRGLVAHGIAILNADDFRVSAMRSLADQDKLRWFGKNSNTEG
DFDASNNGNYQLSASDISLDEMGCAEFVLNEKNEDKSKNSVRVHLAIQGQHNVMNAMAAS
NVARYFGMNLDSIAKVLHEVSHISPHRMQLSKISNNNNVFTLIDDSFNANPDSMKAGIDG
LCSYENHDLHDLNVNTEEDLTSKKNNIFRIAVLGSMLELGSNENNMHESIGEYVAKHNID
ALIAVGSKFDKKLDELAGCIYKGAKDNWQNKSLDVENGVYFVHDCTEADNVVWNLVAAHS
SSVVLLKGSHASGLSVLAERWSKLNESLSEHTEVNL
NT seq 1731 nt   +upstreamnt  +downstreamnt
atgcaaaataagactttgggcaataatacaacgaccaataatatgcgtatgatgcctatg
agtgttaaagaagtagctgctgcggttaatggcagactttttataggtggttgtttagta
aaagaaaaccatagtattacttctgagaaattttgcataacagataatgatgttgttatt
tcagataatgatgttgttatttatgcaacaagtgattctcgtaaagttgtggattcttcc
atatttgtagcaataccaggcgatcgtgttgatggtcatgattttgttcaaaaagctgca
gaacttggtgcaaaaattgcaatagtggagcattttgtaaagttagatgagtctaataat
agtaaaattgctcaaatagttgttgaaaattcggttgaagctcttggacttttagcaaaa
cacaatcttgagcgtcgccgcgcgttaaatacaccgtttagtattatcggaataactggt
tcagtaggaaaaaccactacaaaagatatgctcaaggctcttctttcaacgctcggtaac
actgttgcgccaattggatcttttaataatgaaattggtttgccgttaacatctttgcaa
gtaaatgaaaacacgagattccttattgcagaaatgggagcaaatcatgttggcgaaatc
gcaaaactaaccacaatagctcctcctgatttagctgttgtattgaaggttggtgttgcg
catttaggtgagtttggttctgtagaaagaattgctcaggcaaaaagtgagattgttaga
ggtcttgttgcacacggaatagcaattttaaatgctgatgattttcgagtatctgcaatg
cgttctttagctgatcaagataaattgcgttggtttggtaaaaacagcaatacggaaggt
gattttgacgcatctaacaatggcaattaccaattgtctgcaagtgatatttcattagat
gaaatgggttgtgcagaatttgttcttaatgagaagaatgaggataagtctaaaaactca
gttagagtccatcttgctatacagggacagcataatgttatgaatgcaatggctgcttct
aatgtggcaagatattttggaatgaatcttgatagtattgctaaagttttgcatgaagtt
tcgcatattagtccgcatagaatgcagctttctaaaatttctaacaataataatgttttt
acgcttattgacgattcattcaatgcaaatcctgattccatgaaggctggaattgatgga
ttgtgttcttatgaaaatcatgacttacatgatttaaacgttaatactgaagaagatcta
acaagtaaaaagaataatatttttagaatagcagttcttggatctatgttagagcttggt
tctaatgagaataatatgcatgaatcaataggcgaatatgttgcaaagcataatattgat
gcactaatagctgttggttctaaatttgataaaaaattagatgaactagctggttgcatt
tataaaggtgctaaagataattggcagaataagagccttgatgttgaaaatggcgtatat
tttgttcatgattgcactgaggcggataacgttgtgtggaatcttgtggccgcgcattcg
agtagtgttgtgttattgaaagggtctcatgcttcgggcttgagcgtgttagctgaacgc
tggtctaaacttaatgagagtcttagtgaacatacggaggttaacctgtga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (26)   

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