KEGG   Halomonas sp. KO116: KO116_04004
Entry
KO116_04004       CDS       T03800                                 
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
  KO
K00962  polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
Organism
hak  Halomonas sp. KO116
Pathway
hak03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:hak00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    KO116_04004
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hak03019]
    KO116_04004
   03016 Transfer RNA biogenesis [BR:hak03016]
    KO116_04004
Enzymes [BR:hak01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.8  polyribonucleotide nucleotidyltransferase
     KO116_04004
Messenger RNA biogenesis [BR:hak03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     KO116_04004
Transfer RNA biogenesis [BR:hak03016]
 Prokaryotic type
  tRNA degradation factors
   KO116_04004
SSDB
Motif
Pfam: RNase_PH PNPase RNase_PH_C S1 KH_1 KH_2 S1_2
Other DBs
NCBI-ProteinID: AJY52467
UniProt: A0A0D5M8U3
Position
complement(4332652..4334802)
AA seq 716 aa
MNPVKKTFQYGRSTVTLETGRIARQATGAVMVTMDDTVVLCTVVARKDANPSQPFFPLSV
HYQEKTYAVGKIPGGFFKREGRPTEKETLTSRLIDRPIRPLFPKGFMNEVQVVCTVLSTD
RNHDPDIAALLGTSAALSISGVPFSGPIGAARVGFNEEKGYFLNPTVEELATSELDMVVA
GTEKAVLMVESEAKELLEDEMLGAVLFGHQEMQVAISAINELVAEAGKPRWEWQAAEENQ
ALKAAMADAFEAKVGDAYRITDKMQRQDALAELKAQAIEQLAADEGEPVNDKFSKDDVKG
AFAGLEKRVVRSRVVKGEPRIDGRDNQTVRPLAIEVGVLPKAHGSAVFTRGETQAIAVAT
LGTLRDSQLIESLEGERKDRFMLHYNFPPYSVGEAGFMGGPKRREIGHGRLARRGVQAML
PAEDAFPYTIRVVSEITESNGSSSMASVCGSSLALMDAGVPLKAPVAGIAMGLVKDADGF
AVLTDILGDEDHLGDMDFKVAGSEEGITALQMDIKIEGINEEIMELALQQALTARLSILE
QMNVVISQSRSDVSDNAPSMATIKIDPDKIRDVIGKGGATIRKICEDTGASIDLDDDGTV
RIYAEDKAAAKRAIDTVLAITAEAEIGKLYNGKVVRIADFGAFVNIMPGTDGLVHISQIV
AERVNNVRDFLNEGDDVIVKVLDIDNRNRVKLSMKEITEEEKAAFAAEAAETEATM
NT seq 2151 nt   +upstreamnt  +downstreamnt
gtgaatccggtaaagaaaacgttccagtacggtcgtagcaccgtcacgctcgaaaccggg
cgtattgctcgccaagctaccggcgctgtcatggtaacaatggatgacaccgtcgtactg
tgtaccgtggttgctcgaaaagacgccaacccgagtcagccctttttccccctctcggta
cactaccaagagaaaacctacgcggtgggcaaaattcctggcggcttcttcaagcgcgaa
gggcgccccactgaaaaagagacgctaacctcgcgcctgattgatcgccctattcgcccg
ctgttccccaaaggctttatgaacgaagtgcaggttgtctgtaccgttctttctaccgat
cgtaaccacgatccggatattgccgctttgcttggcacctccgcggcgctgagtatctct
ggcgtaccgtttagtggcccgattggcgcggctcgcgttggttttaacgaagagaaaggc
tacttcctcaacccgacggttgaagaactggctacctctgagctggacatggtcgtcgcc
ggtactgaaaaagccgtactgatggttgagtctgaagccaaagagctgcttgaagacgaa
atgctgggagccgttctgttcggtcaccaggaaatgcaggtcgcgatcagtgccattaac
gagctggttgctgaagcgggcaagccgcgctgggagtggcaagccgccgaagagaaccag
gcgcttaaagccgccatggccgatgcctttgaagccaaggtaggcgatgcctatcgcatc
actgacaagatgcagcgccaggatgcgctagccgaattgaaagctcaagccattgagcaa
ctggcagccgatgaaggcgaaccggttaacgataagttcagtaaagatgacgtgaaaggt
gcctttgctggtttggaaaaacgcgttgtgcgttcacgcgttgtaaaaggcgagccgcgt
attgacggtcgtgataaccaaaccgtgcgccccttggccatcgaagtcggtgtgctgccc
aaagcgcacggctctgctgttttcactcgcggtgagacccaggcgattgcagtggcaacg
ttgggcacgctgcgtgattctcagctcatcgaatcgttggaaggtgagcgtaaagaccgc
tttatgctgcactacaacttccccccctactcggtaggcgaagcgggctttatgggtggc
cccaagcgtcgtgaaatcggtcacggccgcttggcgcgtcgtggtgtgcaggccatgctg
cccgccgaagacgccttcccctacaccatccgtgtcgtctctgaaatcaccgaatctaac
ggttcaagctcgatggcctctgtgtgtggctcttcgctggccttgatggacgcgggtgtg
ccgctaaaggctccggttgctggtattgccatgggcctggtgaaagatgccgatggcttt
gccgtcttgaccgatatcctgggtgacgaagaccaccttggcgatatggactttaaagtg
gccggttctgaagagggcattactgccctgcagatggacatcaagatcgaaggcatcaac
gaagagattatggagctcgcgctgcagcaagcactgaccgcgcgactgagtattctcgag
cagatgaatgtcgtgatcagtcagagtcgtagcgatgtctccgacaacgcgccgtccatg
gcaaccattaaaatcgatcctgacaagattcgtgacgtgattggtaaaggcggcgcgacg
attcgcaaaatttgcgaagacaccggcgcatccattgatcttgacgacgatggcaccgta
cgtatctacgcggaagataaagccgctgcgaaacgcgccatcgacaccgtactggcgatt
accgcagaagcggagatcggcaagctgtacaacggtaaggtagtgcgtattgccgacttc
ggtgcgtttgtgaacatcatgccgggaactgatggcctggtgcacatctcgcagatcgtt
gctgagcgcgttaataacgtgcgcgacttcttgaacgaaggcgacgacgtgattgttaag
gtactcgatatcgacaaccgcaaccgcgtgaagctgtcgatgaaagagatcaccgaagaa
gagaaagccgctttcgcagcggaagcagcggaaaccgaagcgacgatgtaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (18)   

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