KEGG   Halomicrobium sp. LC1Hm: LC1Hm_2977
Entry
LC1Hm_2977        CDS       T06261                                 
Symbol
tef1
Name
(GenBank) Translation elongation factor EF-1 alpha, GTPase
  KO
K03231  elongation factor 1-alpha
Organism
hall  Halomicrobium sp. LC1Hm
Brite
KEGG Orthology (KO) [BR:hall00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hall03019]
    LC1Hm_2977 (tef1)
   03016 Transfer RNA biogenesis [BR:hall03016]
    LC1Hm_2977 (tef1)
   03012 Translation factors [BR:hall03012]
    LC1Hm_2977 (tef1)
   04131 Membrane trafficking [BR:hall04131]
    LC1Hm_2977 (tef1)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:hall04147]
    LC1Hm_2977 (tef1)
Messenger RNA biogenesis [BR:hall03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Trans-acting binding proteins
     LC1Hm_2977 (tef1)
Transfer RNA biogenesis [BR:hall03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    LC1Hm_2977 (tef1)
Translation factors [BR:hall03012]
 Eukaryotic type
  Elongation factors
   LC1Hm_2977 (tef1)
Membrane trafficking [BR:hall04131]
 Autophagy
  Chaperone mediated autophagy (CMA)
   Other CMA associated proteins
    LC1Hm_2977 (tef1)
Exosome [BR:hall04147]
 Exosomal proteins
  Proteins found in most exosomes
   LC1Hm_2977 (tef1)
SSDB
Motif
Pfam: GTP_EFTU GTP_EFTU_D3 GTP_EFTU_D2 MMR_HSR1 RsgA_GTPase Gtr1_RagA GTP_EFTU_D4 AAA_31
Other DBs
NCBI-ProteinID: QGA84006
UniProt: A0A5Q0UR18
Position
complement(2789280..2790542)
AA seq 420 aa
MSDRHQNLAIIGHVDHGKSTLVGRLLYETGSVPEHVIEQHKEEAEEKGKGGFEFAYVMDN
LAEERERGVTIDIAHQEFSTDAYDFTIVDCPGHRDFVKNMITGASQADNAVLVVAADDGV
APQTREHVFLARTLGIGELIVGVNKMDLVDYSESDYEQVVSEVEDLLNQVRFGTEDASFI
PISAFEGDNIAEESDNTDWYDGDILLEALNDLPEPEPPTDAPLRLPIQDVYTIDGIGTVP
VGRVETGILNVGDNVSFQPSDVGGEVKTVEMHHEEVPKAEPGDNVGFNVRGIGKDDIRRG
DVCGPADDPPTVADTFQAQIVVMQHPSVITAGYTPVFHAHTAQVACTIESIDQKIDPSSG
EVAEENPDFIQNGDAAVVTIRPQKPLSIEPSGEIPELGSFAIRDMGQTIAAGKVLDVDER
NT seq 1263 nt   +upstreamnt  +downstreamnt
atgagcgaccgacaccagaacctggccatcatcggccacgtcgaccacggaaagagtacg
ctcgtcggacgactcctctacgagacagggtccgtccccgagcacgtcatcgaacagcac
aaggaagaagccgaggagaagggcaagggcggcttcgagttcgcctacgtcatggacaac
ctcgccgaagagcgcgaacgcggtgtcaccatcgacatcgcccaccaggagttcagcacg
gacgcctacgacttcaccatcgtcgactgtcctggtcaccgcgacttcgtcaagaacatg
atcaccggcgcgagccaggccgacaacgcagtcctcgtcgtcgccgctgacgacggtgtc
gcgccccagactcgcgagcacgtcttcctggcacgcacgctgggcatcggcgagctcatc
gtcggcgtcaacaagatggacctcgtcgactacagcgagtccgactacgaacaggtcgtc
tccgaggtcgaggacctgctcaaccaggtccgcttcggtaccgaggacgccagcttcatc
ccgatctccgcgttcgaaggcgacaacatcgccgaggagtcggacaacaccgactggtac
gacggcgacatcctgctcgaagcactcaacgacctgcccgagccggagccgccgacggac
gcaccgctgcgcctcccgatccaggacgtctacacgatcgacggcatcggtacggtgccg
gtcggccgtgtcgagaccggtatcctgaacgtcggcgacaacgtctccttccagcccagc
gacgtgggcggcgaggtcaagaccgtcgagatgcaccacgaagaggtgcccaaggcagag
cccggcgacaacgtcgggttcaacgtccgtggcatcggcaaggacgacatccgccgcggt
gacgtctgtggcccggccgacgacccgccgacggtcgccgacaccttccaggcccagatc
gtcgtcatgcagcacccgtccgtgatcacggccggttacaccccggtcttccacgcacac
accgcacaggtcgcctgtacgatcgagtccatcgaccagaagatcgacccgtcctccggc
gaggtcgccgaggagaacccggacttcatccagaacggcgacgccgcggtcgtcaccatc
cgaccccagaagcccctcagcatcgagccctcgggcgagatcccggagctcgggagcttc
gccatccgcgacatgggtcagaccatcgcagccgggaaagtcctcgacgtggacgagcga
taa

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Ontology (6)   
   KEGG BRITE (6)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (18)   

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