KEGG   Halarchaeum sp. CBA1220: EFA46_010010
Entry
EFA46_010010      CDS       T06674                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K10843  DNA excision repair protein ERCC-3 [EC:5.6.2.4]
Organism
halr  Halarchaeum sp. CBA1220
Pathway
halr03022  Basal transcription factors
halr03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:halr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    EFA46_010010
  09124 Replication and repair
   03420 Nucleotide excision repair
    EFA46_010010
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:halr03021]
    EFA46_010010
   03400 DNA repair and recombination proteins [BR:halr03400]
    EFA46_010010
Enzymes [BR:halr01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     EFA46_010010
Transcription machinery [BR:halr03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     EFA46_010010
DNA repair and recombination proteins [BR:halr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     EFA46_010010
SSDB
Motif
Pfam: ERCC3_RAD25_C ResIII Helicase_C DEAD SNF2-rel_dom AAA_22 AAA_30 AAA Flavi_DEAD AAA_11 AAA_25 AAA_16 SLFN-g3_helicase AAA_33
Other DBs
NCBI-ProteinID: QLC34523
UniProt: A0A7D5I0Q8
Position
complement(1883915..1885795)
AA seq 626 aa
MSDEADSPDLSLDAFYDALESVGRPVVTAGRLAGVLDWTQAEASDALDRLAEEDHGVERV
DVSNDPVVWFPTDWAKTTERERVVVFPEHREVVVDQPTQFTRAQLAQFATLTDTTGENAY
RYMVRAEDVWGAPHDDLEALRRTVRQALGERYPSLEEFVADQWRRARQFRLYTHEEGYVV
LEANTPEMMGNVAEQHLSDGTIRAPISDTEAWVAAEAVATVKRELYEAGYPVQDDRTLDE
GAELDVELHLSLRDYQRGWVKRFVESGSGVLVGPPGSGKTVAALGVLEQVGRETLVLAPG
RELVAQWRDSILEYTSLTQADVAEYHGGVKEVGPVTIATYSTAGMERHRRLFDEKRWGLV
VYDEAHHIPSDVFRRTTDLQASARLGLSATPVRGDDRETDIYTLIGPPIGTDWEALFDAG
FVQEPEVEIRFVPWAEDEHRYEYASADGHERRMLAASNPAKIDEVRSILDEHPEAKTLVF
VDYLDQGERLGEALSIPFVSGDTPHSRRERLFHEFRAGERDVLLVSRVADEGIDLPDAEL
AIIASGLGGSRRQGAQRAGRTMRPAGRALVYVLATRGTEEEEFARNQTRHLAEKGARVRE
ADAEAFVDANASEHPRDERTGSESDP
NT seq 1881 nt   +upstreamnt  +downstreamnt
gtgagcgacgaagccgacagccccgacctctccctcgacgccttctacgacgctctggag
tccgtcggtcgccccgtggtgaccgccggccgactcgcgggcgtcctcgactggacgcag
gccgaggcgagcgacgccctcgaccgactcgcggaggaggaccacggcgtcgagcgcgtc
gacgtctcgaacgacccggtggtgtggttccccaccgactgggcgaagaccaccgagcgc
gaacgcgtcgtcgtcttccccgagcaccgcgaggtcgtcgtcgaccagcccacgcagttc
acgcgcgcacagctcgcgcagttcgcgaccctcaccgacaccactggcgagaacgcctat
cgctacatggtccgcgccgaggacgtctggggggcgccccacgacgacctggaggcgctg
cgccggaccgtccggcaggcgctcggcgagcgctacccctccctcgaggagttcgtcgcc
gaccagtggcgtcgcgcccgccagttccgcctctacacccacgaggagggctacgtcgtc
ctcgaggcgaacacgcccgagatgatggggaacgtcgccgagcagcatctctccgacggg
accatccgcgcgcccatcagcgacaccgaagcgtgggtcgccgccgaagccgtcgccacc
gtcaagcgcgagctctacgaggccggctacccggtccaggacgaccggacgctcgacgag
ggcgccgagctcgacgtcgagttgcacctctcgcttcgcgactaccagcgcgggtgggtg
aagcgcttcgtcgagtccggctcgggcgtgctcgtcggcccgcccgggagcgggaagacc
gtcgccgcgctcggcgtcctcgaacaggtcggccgcgagacgctcgtcctcgcgccgggg
cgcgaactcgtcgcccagtggcgcgacagcatcctcgagtacacgagcctcacgcaggcg
gacgtcgcggagtaccacggcggcgtgaaggaggtcggccccgtcaccatcgcgacctac
tcgacggcgggcatggagcgccaccgccggctcttcgacgagaagcgctgggggctcgtc
gtctacgacgaagcccaccacatcccgagcgacgtcttccggcgcaccaccgacctgcag
gcctccgcgcgcctcgggctgagcgcgacgccggtccggggcgacgaccgcgagacggac
atctacacgctcatcggcccccccatcggcacggattgggaggcgctcttcgacgcgggc
ttcgtgcaggagcccgaggtcgagatacgcttcgtcccgtgggcggaggacgagcaccgc
tacgagtacgcgagcgcggacggccacgagcgccggatgctcgccgcgtccaaccccgcg
aaaatcgacgaggtccggtcgatactcgacgagcaccccgaggcgaagacgctcgtcttc
gtcgactacctcgatcagggcgagcggctgggcgaggcgctctccatcccgttcgtcagc
ggcgacacgccccactcgcggcgcgagcgcctcttccacgagttccgcgcgggcgagcgc
gacgtcctcctcgtctcgcgggtcgccgacgagggcatcgacctcccggacgccgagctc
gcgatcatcgcctccgggctcggtggctcgcgccggcagggcgcccagcgcgctggccgg
acgatgcgccccgcgggccgcgcgctcgtctacgtgctcgccaccagaggcaccgaggag
gaggagttcgcgcgcaaccagacgcgccacctcgcggagaagggcgcgcgcgttcgggaa
gccgacgcggaggcgttcgtggatgcgaacgcgagtgagcatccacgggacgagcgaacg
gggagcgagagcgacccgtga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (14)   
   Pfam (14)   
All databases (25)   

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