KEGG   Helianthus annuus (common sunflower): 110930841
Entry
110930841         CDS       T05101                                 
Name
(RefSeq) pre-mRNA-splicing factor SPF27 homolog
  KO
K12861  pre-mRNA-splicing factor SPF27
Organism
han  Helianthus annuus (common sunflower)
Pathway
han03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:han00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    110930841
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:han03041]
    110930841
   03400 DNA repair and recombination proteins [BR:han03400]
    110930841
Spliceosome [BR:han03041]
 Complex B
  Other components
   Prp19 complex
    110930841
 Complex C
   Prp19-CDC5 complex
    110930841
DNA repair and recombination proteins [BR:han03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    110930841
SSDB
Motif
Pfam: BCAS2 THOC7 Spectrin Exonuc_VII_L Plk4_PB2 Na_K-ATPase YjbH Arc_MA SLM4 Fib_alpha HMMR_N ZYG-11_interact
Other DBs
NCBI-GeneID: 110930841
NCBI-ProteinID: XP_022029912
Position
3:complement(171509695..171514265)
AA seq 249 aa
MATNTSTNGDTVMLLEAPPSSRPSWSSSAAQIDALPYIDDEYGDPKVKAEVDRLIEEEMR
RSAKRPSDYLKDLPPVAKFNFENYPMLAREYERVRSGKPMVPLDMSRYGLDVPTRNDETA
WKQALQKSQRSVQHQVIRLENLDLMSKYGADVWKQHNQRLEAFLSRMQAQATELNEKIEI
VNRERKYHQQQTAYELNALSAQWKELCEKNIAIEGACVQVENHLEQLKSEAVERGWNLDT
NMENGSSVP
NT seq 750 nt   +upstreamnt  +downstreamnt
atggcaacaaatacatcaaccaacggtgacacagttatgctgctagaagctccgccatct
tcacggccgtcgtggtccagcagcgccgcacaaatcgacgcattgccgtacatcgacgac
gagtacggcgaccccaaagtcaaagcagaggttgaccgtttaatcgaagaagaaatgcgt
cgtagtgctaaacgaccgtctgattatcttaaagacctccctcctgttgccaaattcaac
tttgagaattatccaatgcttgcaagggagtatgagagagtgcgcagtgggaaaccgatg
gtgcctcttgatatgtcaaggtatgggcttgacgttccaacacggaatgatgaaactgct
tggaagcaggcacttcagaaatctcaacgttcagtgcaacatcaagttataaggctagaa
aatttggatctaatgtcaaaatacggggctgatgtttggaaacaacacaatcagagacta
gaagctttcttatcaagaatgcaggcacaggcaaccgagctaaatgaaaagattgaaatt
gttaaccgggaaagaaaatatcatcagcaacaaacggcatacgagctgaatgctttatca
gcacaatggaaggaactctgtgagaagaacattgcaattgaaggtgcatgtgtccaagtt
gaaaaccatcttgaacagttaaaatcagaagcagtagagagaggctggaatctcgatact
aatatggagaatggctcgtctgtgccttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   KEGG ORTHOLOGY (1)   
   RefGene (13)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (12)   
   Pfam (12)   
All databases (36)   

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