KEGG   Helianthus annuus (common sunflower): 110941615
Entry
110941615         CDS       T05101                                 
Name
(RefSeq) DNA mismatch repair protein MSH2
  KO
K08735  DNA mismatch repair protein MSH2
Organism
han  Helianthus annuus (common sunflower)
Pathway
han03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:han00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    110941615
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:han03400]
    110941615
DNA repair and recombination proteins [BR:han03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     110941615
SSDB
Motif
Pfam: MutS_V MutS_III MutS_IV MutS_II MutS_I ATG17_like DUF2465 H-kinase_dim
Other DBs
NCBI-GeneID: 110941615
NCBI-ProteinID: XP_022038966
Position
5:143124068..143130930
AA seq 935 aa
MDADLQDHNKLPDLKLDAKQAQGFLTFFKKLPNDAKAVRFFDRRDYFTAHGENASFIANT
YYHTTTVLKQIGNGPDALSSVSVSKNMFETIVRDLLLERTDHSLELYEGSGSNWRLTKRG
TPGNLNSFEDILFAKNDMQDSPAIVAIIPNFRETGCTVGLGYVDLSKRVLGITEFLDDNH
FTNVESALVSLGCKECVLPTEITKSSECKPLYDVMSKCGVMVTERKKAEFKGRDLTQDLG
RLIKGSNEPVRDLVSSFEHAPMALGALLSYAELLSDENNYGNYTIGWYNLNSYMRLDSAA
MRALNVMESKTDANKNFSLFGLMNRTCTAGMGRRLLHMWLKQPLLDVNEINTRLDLVQAF
VDDTAFRQDLRQHLKRIHDIERLMRCVEKRRDSLLHIVKLYQSSIRIPYIKSAMERYDGQ
FVSLIKERFMDRFDYLTNDDHLNKFIGLVEVSVDLDQLENGEYMISPGYDSQLSDLKNEQ
ESVEQQIHDLHQKTANDLELAIDKLKMDKGTQFGHVFRITKKEEPKVRKKLNTHFIILET
RKDGVKFTNTKLKKLGDQYQKVLEEYKSCQKELVARVVNTASTFSEVFDDLAKLLSELDV
LLSFADLAASSPTPYTRPDITPSDTGDIILEGSRHPCVEAQDWVNFIPNDCKLVRGESWF
QIITGPNMGGKSTFIRQIGVNILMAQVGSFVPCDKATISIRDCIFARVGAGDCQLRGVST
FMQEMLETASILKGATDKSLIIIDELGRGTSTYDGFGLAWAICEHLVEVIKAPTLFATHF
HELTALAHENSGQPSGIANYHVSAHIDSSSRKLTMLYKVEAGACDQSFGIHVAEFANFPE
SVVSLAREKAAELEDFTPVSIVSNEAEQEAGRKRKKPSEPDDMAIGAPRARKFLKDFSEL
PLDKMDLKQALQEVKRLKNELQDDVGNCKWLQQFI
NT seq 2808 nt   +upstreamnt  +downstreamnt
atggatgcagatttacaggatcacaacaagctacctgacctcaaattagatgctaaacaa
gctcaagggtttctcaccttcttcaagaaattacccaatgatgcgaaagccgttcgcttt
ttcgatcgacgggattacttcacagctcatggtgagaatgcttcatttattgcaaataca
tattatcacaccacaacagtcttgaaacaaattggtaatgggcccgatgctttatctagt
gtgagtgtaagcaaaaacatgttcgaaactatcgttcgcgatcttttactagaaagaacc
gatcatagtcttgaattatacgagggcagcgggtcaaactggcgattaacaaaacgagga
acccctggtaatctcaacagcttcgaagacattttatttgcaaaaaacgatatgcaagat
tcaccagcaatcgtagccattattccaaattttcgcgaaaccgggtgcaccgttggatta
ggttatgtcgatctttctaaacgggtacttggcattaccgagtttctcgatgataaccac
tttacgaacgttgaatcggctttagtttctctcgggtgcaaagagtgtgttttacctact
gaaatcacgaaatcgagtgagtgtaaacctttgtatgatgtaatgtcgaaatgtggtgtg
atggtaaccgaaagaaagaaagccgagtttaaaggacgagatttaacgcaagatcttggt
aggttaatcaaaggttcaaatgaaccggttcgtgatctcgtttcttctttcgaacatgca
cctatggctttaggggcgttattgtcttacgctgagttactttccgatgaaaacaattac
gggaattatacgatcggttggtataatcttaacagttacatgagattagactctgctgct
atgagggcgttgaatgttatggagagtaaaacggatgctaacaagaattttagtctgttt
ggtctcatgaatagaacatgcacagctggaatgggtcgaaggttactacacatgtggcta
aaacaacctttgttggatgtcaacgagattaatacaagactagatttggtgcaagcgttt
gttgacgataccgcttttcgtcaggatttacgtcagcatttgaaaagaatacacgacatt
gaacggttgatgcgctgtgttgagaaacgaagagatagtttgttacatatcgtcaagctt
tatcagtcgagcattagaattccatacattaaaagcgcaatggaacgatacgatggtcaa
tttgtatcactaatcaaggaaagattcatggatcgtttcgattatctgactaacgatgat
cacttgaataagtttattggtctcgttgaagtttctgttgaccttgaccaactcgaaaac
ggagaatacatgatttcaccgggttacgattctcagttatcagacctgaaaaacgagcaa
gaatcagtagaacaacaaatacacgatttgcatcaaaaaaccgccaatgatctcgagcta
gctatcgacaagttaaagatggataagggtactcagttcggacacgtttttagaatcaca
aagaaagaagaaccaaaagtacggaagaagcttaacacccattttatcattctcgaaacc
cgaaaagacggtgtaaaatttacaaatactaagctgaagaaattaggagatcagtaccag
aaggttctagaagaatataaaagctgtcagaaggagcttgtagctagagttgtcaataca
gcatcaactttctctgaagtgtttgacgatttggctaagttgctctccgagctggacgtc
ttgcttagttttgctgacctggctgctagcagccccaccccgtatacgagacccgatatc
acaccatcggatacgggagatatcatattggaaggaagtagacacccttgtgtggaagct
caagattgggtgaattttataccaaacgactgcaaacttgtgaggggagagagttggttt
caaattatcaccgggcctaacatgggtggaaaatccacatttatacgccagattggtgtg
aacattcttatggcgcaagtgggctcttttgttccttgtgacaaagcaaccatttctatt
cgtgactgtatttttgcacgtgttggtgctggtgactgtcagttacgtggagtttccacc
tttatgcaagaaatgcttgagacagcatcaattctaaaaggcgccactgataaatcattg
attattattgatgaattgggccgtggaacatcaacttatgatggatttggtttagcgtgg
gctatatgtgagcacttggttgaagtaattaaagcgcctactttattcgccactcatttc
catgagttgactgcattagctcatgaaaattctggtcaaccgtccggtatagcaaattat
catgtcagtgcacacattgactcctcaagccggaagctaacaatgctttacaaggttgaa
gcaggggcttgtgatcagagttttggaattcatgttgcagagtttgcaaactttcctgaa
agtgtcgtgtctcttgctagagaaaaagctgctgagctggaggacttcacacccgtttca
attgtatcaaacgaggctgaacaagaggctggccggaaacggaagaagccatctgaacca
gatgatatggccataggtgctcctcgggcccgcaagttcttaaaggacttctcggaattg
ccacttgacaaaatggacttgaagcaggctttgcaagaagtgaaacggttaaagaacgag
ctgcaggatgatgttggcaactgtaaatggctccagcagttcatataa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (8)   
   Pfam (8)   
All databases (28)   

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