KEGG   Hyphomicrobium denitrificans 1NES1: HYPDE_38288
Entry
HYPDE_38288       CDS       T02646                                 
Name
(GenBank) D-3-phosphoglycerate dehydrogenase
  KO
K00058  D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
Organism
hdt  Hyphomicrobium denitrificans 1NES1
Pathway
hdt00260  Glycine, serine and threonine metabolism
hdt00270  Cysteine and methionine metabolism
hdt00680  Methane metabolism
hdt01100  Metabolic pathways
hdt01110  Biosynthesis of secondary metabolites
hdt01120  Microbial metabolism in diverse environments
hdt01200  Carbon metabolism
hdt01230  Biosynthesis of amino acids
Module
hdt_M00020  Serine biosynthesis, glycerate-3P => serine
Brite
KEGG Orthology (KO) [BR:hdt00001]
 09100 Metabolism
  09102 Energy metabolism
   00680 Methane metabolism
    HYPDE_38288
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    HYPDE_38288
   00270 Cysteine and methionine metabolism
    HYPDE_38288
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:hdt04147]
    HYPDE_38288
Enzymes [BR:hdt01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.95  phosphoglycerate dehydrogenase
     HYPDE_38288
    1.1.1.399  2-oxoglutarate reductase
     HYPDE_38288
Exosome [BR:hdt04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   HYPDE_38288
SSDB
Motif
Pfam: 2-Hacid_dh_C 2-Hacid_dh PGDH_inter ACT NAD_binding_2 3HCDH_N Gp_dh_N Resolvase
Other DBs
NCBI-ProteinID: AGK59329
UniProt: N0B6T9
Position
3126373..3127965
AA seq 530 aa
MPDTLQVLIADPIHEDGRKLLATYPDIHVDIATGLDEEGLILKIPTYDALIVRSKSRVTR
SVIEAGRALKAIGRAGIGVDNIDISAATEHGIVVFNTPDANATTTAELTVAHMMSLSRHL
PQADRSVRSNEWQPTRFVGTELAGKTVGIIGFGTIGRLVAERCAALKMKVLAYDPYVTPE
IMCQYSAAQRNLDSLLASSDYVTLHCPLTDKTHNLIDATRLSAMKSGARLINCARGGLVD
EKALLDALRTGHIAGAALDVFAKEPPLGSEFIACDNVVLTPHLGASTKEAQQAVSVQIAE
DVAKFLTTGEAESAVNLPRVSSEQFSQSRPYQTLALALGRLAGALTEAPISELVVRLFGR
IADFDPRPITVEAVIGLLESRLAERVNRVNATHLATAQGIEVRESRSQHVRDYLSLIEIC
VVAPNKSTTVAGTLLGGRQPHLVRIDSYHVEAPLGGHFLFTRHRDQPGVVGTLGGILGRE
KINISRMNVGVDGMVDTAIALIGVSAPLPENAIAEIRALPVIFEVFGISL
NT seq 1593 nt   +upstreamnt  +downstreamnt
gtgccggacaccttacaggtccttatcgccgatccgatccatgaggatgggcgcaagttg
ctcgctacgtatcccgatattcacgtcgatatcgcgacaggcctcgatgaagagggattg
attttaaagattccgacatacgacgcactgatcgtccgttcgaaatcacgggttacacga
tccgtcattgaagctggtcgcgcgctcaaagctattggccgagccgggatcggcgtcgac
aatattgatatctcggcagcgactgagcacggcattgtcgtattcaacacacccgacgct
aatgcgacgacgaccgctgagcttaccgtcgcgcatatgatgtcactcagccgtcatctg
ccgcaggccgatcgttcggtacgcagtaatgaatggcaaccaacacgctttgtcggcacg
gaactcgccggcaagacggtcggtattatcggtttcgggacgattggacgtctcgtagcg
gagcgatgtgcggcgctcaaaatgaaagtgctcgcctacgatccctacgtcacccccgag
atcatgtgtcaatattcagctgcgcaacggaacttggactcgcttctcgcaagttccgat
tatgtcacgctacattgtcccctgaccgataagacgcataatctgatcgatgcgacacgc
ctgtcagcaatgaagtccggcgcgagactcatcaactgtgctcgcggcgggctcgtcgat
gaaaaagcgctgctcgatgcgctgcgcacgggacatatcgcgggcgcagcgctcgatgtt
tttgccaaagagccgccgcttggctcagaattcattgcgtgcgacaacgtcgtgctgacg
ccgcacctcggagcatcgacgaaggaggctcaacaggccgtcagcgtccagattgccgaa
gatgtcgctaaatttctgactacgggagaagcggagtcggccgtgaacctgccgcgcgtc
tcatccgaacagttcagccaatcccggccctatcaaaccttggcgttggcacttgggcga
ttggccggagcgctgaccgaggcgccgatcagcgagcttgttgtccgcctcttcggcagg
atcgctgatttcgatccgcgaccgataacggtcgaagctgttatcggcttgcttgaatcc
cggctcgccgaacgtgtcaaccgcgtcaacgcgacccatcttgcaacagcacaagggatc
gaagttcgagaatcgcgatcgcaacacgtacgcgattacctgtcgctcatcgaaatctgc
gtggtcgcgccaaacaaatcaacgaccgtcgccggcacgttgctcggtggccgccagccg
catctcgttcgtatcgacagttaccacgttgaggcaccactcggaggtcattttctcttt
acgcgccatcgtgatcaacctggcgtcgtcggcacattgggaggcattctcggtcgagag
aagatcaacatttctcgcatgaatgtcggcgtagacggcatggtcgatacggcgattgct
ctgatcggcgtttcagcacctctcccggagaacgcgatcgctgaaatcagagcgctaccg
gtgatcttcgaagttttcggaataagcctgtga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (9)   
   KEGG PATHWAY (8)   
   KEGG MODULE (1)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (3)   
   KEGG ENZYME (2)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (43)   

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