KEGG   Helicobacter pylori Rif2: C730_03060
Entry
C730_03060        CDS       T02318                                 
Name
(GenBank) type III restriction enzyme R protein (res)
  KO
K01156  type III restriction enzyme [EC:3.1.21.5]
Organism
hei  Helicobacter pylori Rif2
Brite
KEGG Orthology (KO) [BR:hei00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:hei02048]
    C730_03060
Enzymes [BR:hei01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.5  type III site-specific deoxyribonuclease
     C730_03060
Prokaryotic defense system [BR:hei02048]
 Restriction and modification system (R-M system)
  Type III R-M system
   C730_03060
SSDB
Motif
Pfam: RE_endonuc ResIII DEAD Helicase_C
Other DBs
NCBI-ProteinID: AFV44998
Position
623240..626182
AA seq 980 aa
MIFEKQDYQQECIYNIITLLDGFDFKRHDALNLKDCLNQFHAACEIPVKNVSGKLNVDVL
METGTGKTFTYLNLIFALHKAYGQNKFIIFVPRKAILESVKQNIRLTKDYFYLEFKRHLK
TYTYEGVKSPSNIINHYIKNQDELSVLLLTNSAIDKEGNILNKNSENLFNTKSIFENIAD
LKPISIIDEPHLLKGEAFGKYFGKIGALYFRFGATFAKEKEHALSNVAFCLDSISAFRNY
LVKQIRIHSVMQDAQSPFLLNADSKSAKIAFYKAGILKQITLSKGEDLGKINASFNGVSL
VKTAKDKAYLSNGATLEKASYKLAQDEISALLEKAIDLHFEKEAFLFDQNIKALSLFFIP
KIEDFRQIDNKGTPFIKTEFERLYKLKRASILARENLSPSYKEYLKRDFDESGNLRVHQG
YFSGDSVALNKGKKESKKEDIEANDIKMILSEKEKLLSFQTPLRFIFSVWALQEGWDNPN
IFTLIKLANSTSETSRHQQVGRGLRIAINQEGKRVTHGFLKGNDNAFYKINYLDMLVSGE
EVGFIEGLQKEIEASSFIGGGNALDREDLAKLGLNEREINKLFVELENSNALEFDETNNA
YKIIAPICETMQNNEERIKDFLSDEEYHAVLSAFKMAENPTNKRDQIINANQPQEKVKIR
QNLAKEFKELWQTINAQSQLSYQNIQKTKLIESIAKAFNESHVSAEVIKFESKRYDPQTN
RIITEQSSTLKIRDYANALQKEINALLLDFAKDERLPLKFTLELYNALNKEHFTNSPKKA
FKLLKGIIKDKLHENLLSCVSYGFCQNAFSNTAFDKTDPLYCEDGSPKNEIEKHKIGKYK
SAQTPSPNYLYETIIYDSKIEEEVSEEGVQTLEGKSIEVFAKLPKFKIPTPYKNYEPDFA
YLLKDEKGAKIFFVCETKGYEKESDIPPDEKRKIEYAKKFFETLSQNLKNAKKEIRVVFA
TRINKQDLFNTLKNALKETP
NT seq 2943 nt   +upstreamnt  +downstreamnt
atgatttttgaaaagcaagactaccaacaagagtgtatctacaatatcatcacgctttta
gacggctttgattttaagcgccacgatgccttaaatctaaaagattgtttaaatcaattt
catgctgcatgcgaaattcctgtcaaaaatgtaagcggcaagctcaatgttgatgttttg
atggaaacaggcacgggcaaaactttcacttacttgaatttgatctttgcactccataag
gcttatgggcaaaataaattcatcatctttgtcccacgaaaagccattttggagtcggtt
aagcaaaatatccgccttacgaaagattatttttatttagaattcaaacgccacctgaaa
acctacacttatgaaggggttaaatcaccaagcaacattatcaatcattacattaaaaac
caagatgaactgagcgtcttgctcctcactaacagcgcgattgacaaggagggaaacata
ctcaataaaaacagcgaaaacctttttaacaccaaaagcatttttgaaaatatcgctgat
ttaaagcctatttctatcatagacgagccgcatttgcttaagggtgaagcgtttggtaag
tattttggtaaaataggcgcgctttattttcgctttggggcgacttttgccaaagaaaaa
gagcatgctttaagcaatgttgccttttgtttggattcaatcagcgcgtttagaaattac
cttgtcaaacaaatccgcatccattctgtcatgcaagatgcgcaaagcccgtttttgctc
aatgcggattcaaaaagcgcaaaaattgccttttacaaagcgggcattcttaaacaaatc
acgctttcaaagggagaggatttaggcaaaattaacgcttcttttaacggcgttagtttg
gttaaaaccgccaaagacaaggcttatttgagtaatggcgctacgcttgaaaaggcttct
tataaactcgcgcaagatgaaatcagcgctcttttagaaaaagccattgatttgcatttt
gaaaaagaggcgtttttatttgatcaaaacattaaagcgttaagtctgttttttatcccc
aaaattgaggattttaggcaaattgataacaaaggcacgccctttattaaaaccgaattt
gaaaggctttacaaactcaaacgcgcttcaattctagcaagggaaaatttatcgccaagc
tataaagaatatttgaaaagagattttgatgagagcggtaatttacgcgtccatcaaggc
tattttagcggcgatagcgtagcgctcaataaaggcaaaaaagaaagcaaaaaagaagac
attgaagccaacgacattaaaatgattttaagcgaaaaagaaaaactgctttcatttcaa
acgcctttgcgttttatttttagcgtgtgggctttgcaagagggctgggataatccaaac
atttttacccttattaaactggcaaattctaccagcgaaaccagccgccatcagcaagtg
gggcgcgggttaagaattgcgattaatcaagagggcaagcgcgttacgcatggattttta
aaaggcaatgacaacgctttttataaaataaactaccttgatatgttagtgagtggcgaa
gaagtgggctttatagagggtttgcaaaaagagattgaagcgagcagctttattggtggt
ggcaacgcgctagacagagaggatttagccaagttagggcttaatgaaagagagataaat
aaacttttcgttgaattagaaaattcaaacgccctagaatttgacgaaaccaacaacgct
tacaaaatcattgcccctatttgtgagacgatgcaaaacaatgaagaaaggataaaagac
tttttaagcgatgaagaataccacgccgttttaagcgcctttaaaatggctgaaaatcca
accaacaagcgcgatcaaattataaacgctaaccaacctcaagaaaaagttaaaatccgc
caaaatttagctaaggaatttaaagagttgtggcaaaccatcaacgcgcaaagccaatta
agctatcaaaatatccaaaaaaccaagctgatagaatctatcgccaaagcgtttaatgag
agccatgtgagtgctgaggtaatcaaatttgaaagcaaaaggtatgacccacaaaccaac
aggatcatcacagagcaatcaagcaccttaaaaatcagagactacgctaacgctttacaa
aaagaaatcaacgcgcttttgcttgactttgccaaagatgagcgcttacccttaaaattc
acgcttgaactctacaacgctttaaacaaagagcatttcacaaactcacccaaaaaagcc
tttaaattgcttaaaggcatcattaaagataagttgcatgaaaacttgctttcttgcgtg
agttatggattttgccaaaacgccttttctaacacggcttttgataaaaccgatccgctt
tattgtgaagatggctcgcccaaaaatgagattgaaaaacacaaaataggcaaatacaaa
agtgcgcaaactccaagcccaaactatctttatgagacgatcatttatgattctaaaatt
gaagaagaagtgagtgaagagggggtgcaaacactggaaggtaaaagcatagaagttttt
gccaagctccctaaatttaaaatcccaacgccttataaaaactatgagcctgattttgct
tatttgcttaaagatgaaaagggtgcaaaaatcttttttgtttgcgaaaccaaaggttat
gaaaaagaaagcgacatcccgccagatgaaaagcgtaaaattgaatacgctaagaaattt
tttgaaacgctatctcaaaatttaaagaacgcgaaaaaagaaatacgagtcgtttttgcc
acacgcattaacaaacaagatttattcaacacgcttaaaaacgcattaaaggaaacgcca
tga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (12)   

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