KEGG   Helicobacter pylori Puno120: HPPN120_03540
Entry
HPPN120_03540     CDS       T01919                                 
Name
(GenBank) DNA polymerase III subunits gamma and tau
  KO
K02343  DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
Organism
hep  Helicobacter pylori Puno120
Pathway
hep03030  DNA replication
hep03430  Mismatch repair
hep03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:hep00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    HPPN120_03540
   03430 Mismatch repair
    HPPN120_03540
   03440 Homologous recombination
    HPPN120_03540
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hep03032]
    HPPN120_03540
   03400 DNA repair and recombination proteins [BR:hep03400]
    HPPN120_03540
Enzymes [BR:hep01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     HPPN120_03540
DNA replication proteins [BR:hep03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     HPPN120_03540
DNA repair and recombination proteins [BR:hep03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     HPPN120_03540
SSDB
Motif
Pfam: DNA_pol3_delta2 AAA AAA_22 RuvB_N AAA_14 AAA_5 AAA_30 DNA_pol3_gamma3 DEAD AAA_19 AAA_assoc_2
Other DBs
NCBI-ProteinID: AEN15327
UniProt: G2M5U1
Position
complement(719715..721454)
AA seq 579 aa
MQVLALKYRPKHFSELVGQESVAKTLSLALDNQRLANAYLFSGLRGSGKTSSSRIFARAL
MCEEGPKAVPCDTCTQCQSALNNHHIDIIEMDGASNRGIDDVRNLIEQTRYKPSFGRYKI
FIIDEVHMFTTEAFNALLKTLEEPPSHVKFLLATTDALKLPATILSRTQHFRFKKIPENS
VISHLKTILEKEQVSYETSALEKLAHSGQGSLRDTITLLEQAINYCDNAITESKVAEMLG
AIDRNVLEDFFQSLINQDEARLQERYAILENYETESVLEEMMLFLKAKLLSPDTYSILLI
ERFFKIIMSGLSLLKEGANASFVLLLLKMKFKEALKLKALDDAILELEQSKESVLKPLNQ
NANAFKQEPKNAEKIESAEKIEKLEKRENAETPQTPMLSAKDRIFHNLFKQVQTLVYERN
YELGAVFEKNIRFIDFDSQTKTLTWESLATHKDKELLRERFKIVKSIVDGVFGKGENIKI
ALKNHSENKNALEVVKEFKFPYSKPKPTTETTAETKENDTKEAIKKETKEKKIKENDTKK
IQETQPKETPTALQEFMANHSDLIEEIKSEFEIKSVELL
NT seq 1740 nt   +upstreamnt  +downstreamnt
atgcaagttttagcgttaaaataccgccccaaacattttagcgagctagtcggtcaagag
agcgtggctaaaacgctttctttagccctagacaaccagcgtttggctaacgcttattta
ttcagcgggttaagaggttcagggaaaaccagctcttctaggatttttgctagggcttta
atgtgtgaagaagggccaaaagccgtgccttgcgatacttgcacccaatgccagagcgct
ttaaacaaccaccatatagatattatagaaatggacggagcgtctaatagggggattgat
gatgtccgtaatctcatagagcaaacgcgctacaaaccaagctttgggcgctataaaatc
tttatcattgatgaagtgcatatgttcaccaccgaagcgtttaacgcgctcttaaagact
ttagaagagcctcctagccatgtgaaattccttctagcgacaacggacgccttgaaattg
cccgctaccatactcagccgcactcagcatttccggtttaaaaaaatccctgaaaattcc
gttatttctcacttaaaaaccattttagaaaaagaacaagtgagctatgaaacaagcgcg
ttagaaaaactggctcacagcgggcaggggagcttgagggatacgatcactcttttagag
caagccatcaattattgcgataacgctatcacagaaagcaaagtggctgaaatgttagga
gcgattgatagaaacgttttagaagatttttttcaaagcctaatcaaccaagatgaagcg
cgattgcaagagcgttatgccattttagagaattatgaaaccgagagcgttttagaagaa
atgatgctttttttgaaagcgaaattattaagccctgatacttattccatccttttgata
gagcgcttttttaaaatcatcatgagcggtttgagccttttaaaagaaggggctaatgcc
agttttgtgctgttgttattgaaaatgaaattcaaagaagctttgaaacttaaagcccta
gacgatgcgattttggaattagagcaaagtaaagaaagcgttttaaaacccttaaaccaa
aacgctaacgcctttaaacaagaaccaaaaaacgcagaaaaaatagagagcgcagaaaaa
atagaaaaactagaaaaaagagaaaacgcagaaaccccacaaactcccatgctttcagct
aaagatcgcattttccataaccttttcaagcaagttcaaacattggtttatgagcgcaat
tacgagttaggggcggtgtttgaaaaaaatatccgtttcattgattttgacagccagact
aaaaccttgacttgggagtctttagccacccataaagataaagagcttttaagagagcgt
tttaaaatcgtgaaaagcatcgttgatggggtttttggcaagggtgaaaatattaaaatc
gctttaaaaaatcattcagaaaataaaaacgctttagaagtggttaaagagtttaaattc
ccttattcaaagcccaaaccaaccaccgaaacgacggctgaaactaaagaaaacgacact
aaagaggcgatcaaaaaagaaactaaagaaaaaaagattaaagaaaacgacactaaaaag
attcaagaaacccaaccaaaagaaacccctacagccttgcaagaatttatggctaaccat
tctgatctcattgaagagattaagagcgagtttgaaatcaaaagcgtggaattgttatga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (11)   
   Pfam (11)   
All databases (24)   

Download RDF
DBGET integrated database retrieval system