KEGG   Halobacteroides halobius: Halha_0708
Entry
Halha_0708        CDS       T02401                                 
Name
(GenBank) polyribonucleotide nucleotidyltransferase
  KO
K00962  polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
Organism
hhl  Halobacteroides halobius
Pathway
hhl03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:hhl00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Halha_0708
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hhl03019]
    Halha_0708
   03016 Transfer RNA biogenesis [BR:hhl03016]
    Halha_0708
Enzymes [BR:hhl01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.8  polyribonucleotide nucleotidyltransferase
     Halha_0708
Messenger RNA biogenesis [BR:hhl03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     Halha_0708
Transfer RNA biogenesis [BR:hhl03016]
 Prokaryotic type
  tRNA degradation factors
   Halha_0708
SSDB
Motif
Pfam: RNase_PH RNase_PH_C S1 PNPase KH_1 S1_2 Par3_HAL_N_term SPATA25
Other DBs
NCBI-ProteinID: AGB40681
UniProt: L0K6M7
Position
683235..685352
AA seq 705 aa
MAQKWSMELGGSNLTIETGELAQQANGSVLVRYGDTVVLVTATMSDPRPGINYFPLMVNY
EERLYAVGKIPGGFIKREGRPSDAATLTARLIDRPLRPLFPEGFRHDVQVVATVLSVDSD
NAPDIAAMIGASAALAISDIPFEAPIGGVRVGLVDGEYMINPTIAQMKETKIDLTVAGTE
EAVMMVEAGANEATEEEVIEAIEFGHQTIKEIVKLEKEMVAEIGKEKADVELEIIDRPEI
EEEVKDYVGDDLKEALQTKVKAKRSKQISAVKEDTKKYFADKYDDAEDLDEIKEVVSNTL
DKIIKNVIRSLVIEEGTRIDGRDLDEVRPIWSKVDLLPRAHGSGVFTRGQTQAMTVATLG
AVGDEQVLDGLEEKESKRYMHHYNFPPYSVGETNPLRSPGRREIGHGTLGERALRPMIPN
SDEFPYTLRLVSEVLSSNGSTSQASICGSTLALMDAGVPIKAPVSGIAMGLIKADDEVAI
LTDIQGIEDHNGDMDFKVAGTKDGITALQLDIKIKGISKEILARGLEQARKGRLHILDKM
LETIDQPRTEKSEYAPAIMTLKIDEDKIKDVIGKGGKTIKGIIDETGVKIDIEDDGTIYI
AAEDQASGKEARKIIENLTKEIEVGQYHMGTVKRTTDFGAFVEIVPGKEGLLHISELADR
HVKKVENIVKKDDELLVKVIDIDDRGRISLSRKQALEEQEERENN
NT seq 2118 nt   +upstreamnt  +downstreamnt
atggcacaaaaatggtcaatggagcttggcggttccaatttaacaattgaaacaggagaa
ttggctcaacaagctaatgggtcagttttagtacgttatggtgataccgtagtattagtt
acggcaactatgtctgatccaagacctggaattaattattttcctttaatggttaactat
gaagaaagattatatgctgtaggaaagattccaggaggttttattaaacgagagggtaga
ccgagtgatgcggcaacattaactgcaagattgattgatcgtccgttacgtcctttattt
ccagaaggatttagacatgatgttcaggtagtagctactgttttatcagttgattcagat
aatgctccagatattgcagctatgattggagcttctgctgcgttagcaatctctgatatt
ccatttgaagcaccaattggtggggttagagtaggtttggttgatggagaatatatgatt
aatcctactatagcacaaatgaaagaaactaagattgatttaacggttgcaggaactgaa
gaggcagttatgatggtagaagctggtgctaatgaagcaacagaagaggaagtaattgaa
gctattgaatttgggcatcaaacaatcaaggaaattgttaaattagaaaaagaaatggta
gctgaaatcggaaaagaaaaagctgatgttgaattagagattatagatcgaccagaaatt
gaagaagaagtcaaagactatgttggagatgatttaaaagaagctttacaaactaaagtt
aaagctaaaagaagtaagcaaattagtgcggttaaagaagataccaaaaaatactttgct
gacaaatatgatgatgcagaagatttagatgaaattaaagaggtagtcagtaatacatta
gataagattataaagaatgtaattagaagcttggttattgaagaaggtactcgaattgat
ggacgagatttagatgaggtgcgtccaatttggagtaaagttgatctattacctcgagct
catgggtctggagtctttactcggggccaaactcaagcaatgacagtagctactttaggt
gctgtaggggatgagcaagttttagatgggttagaagaaaaagaatctaaacgatatatg
catcattataattttcctccttatagtgtaggggagactaatccattacgctcaccaggc
agaagagaaattggacatggtactttaggagagagggctttaaggccaatgattccaaat
agtgatgaattcccatatacacttagattagtttctgaagtattatcttctaatggttct
acttcacaggctagtatttgtggaagtactttagctttaatggatgcaggagttccaatt
aaggctccagtatcaggaattgctatgggactaattaaagcagatgatgaagttgctatt
ttaactgatatccaaggaatagaagatcacaatggtgatatggactttaaagtagcagga
actaaagatggaattactgctttacaattagatattaaaatcaaaggtatttctaaggaa
atattagccagaggtttagagcaagctagaaaaggtagacttcatattttagataaaatg
ttagagacaatagaccaacctagaactgaaaaatctgaatatgctcctgcaattatgact
ttaaagattgatgaagataagattaaagatgtaattggaaaaggtggtaagacgattaag
ggaattattgatgaaacaggagttaagattgatatagaagatgatggaactatctatata
gccgctgaagatcaggcaagcggtaaagaagctagaaagataattgagaatttaacaaaa
gaaattgaagtagggcaatatcatatggggacagtaaaacgaactactgattttggagct
tttgtagaaatcgtccctggaaaagaaggtttacttcatatttctgaattagctgaccga
catgttaagaaagtagagaatattgttaaaaaagatgatgagttgttagttaaagtaatt
gatattgatgatcgaggtagaattagtttatcccgtaagcaagcgttagaagagcaagaa
gagcgtgagaataattaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (27)   
   KEGG ORTHOLOGY (1)   
   RefGene (24)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (43)   

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