KEGG   Haloarcula hispanica N601: HISP_12175
Entry
HISP_12175        CDS       T02949                                 
Name
(GenBank) transcription initiation factor IIB 2
  KO
K03124  transcription initiation factor TFIIB
Organism
hhn  Haloarcula hispanica N601
Pathway
hhn03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:hhn00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    HISP_12175
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:hhn03021]
    HISP_12175
Transcription machinery [BR:hhn03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIB
     HISP_12175
 Prokaryotic type
  Archaeal type
    TFB
     HISP_12175
SSDB
Motif
Pfam: TFIIB TF_Zn_Ribbon Trm112p LysW-like_globular DZR_2 Anti-TRAP Cyclin_C HTH_Tnp_ISL3 Sigma70_r4 A2L_zn_ribbon DZR OrfB_Zn_ribbon
Other DBs
NCBI-ProteinID: AHB66725
UniProt: V5TQ05
Position
1:2318410..2319375
AA seq 321 aa
MSEHTRTRQQHEEQTTESTESESTACPECSGSLVIDDEHGETVCEDCGLVVESDEIDRGP
EWRAFDSSEKDEKSRVGAPTTNMMHDKGLSTNIDWRDKDAYGNSLSGKQRQKMQRLRKWN
ERFRTRDSKERNLKQALGEIDRMASALGLPENVRETASVIYRRALDEDLLPGRSIEGVST
ASVYAAARQAGVPRSLDEITEVSRVEKSEIARTYRYVVRELSLEVRPADPESYVPRFASS
LELSDEAEHRARQLLQNAKEQGVHSGKSPVGLAAAAVYAAALLTNEKTTQAAVSEVADIS
EVTIRNRYHELLEAEQDLPVA
NT seq 966 nt   +upstreamnt  +downstreamnt
atgagtgaacacacacggacgcgacagcaacacgaggaacagacgactgagtcgacggaa
tcggagagcactgcgtgcccggagtgcagtggctcgctcgtcatcgacgacgaacacggc
gaaacggtctgtgaggactgtggcctcgtcgtcgagtccgacgaaatcgaccgcggcccc
gagtggcgcgcattcgactccagcgagaaagacgagaagtcccgcgtcggcgcaccgacg
acgaacatgatgcacgacaagggcctctcgacgaacattgactggcgcgacaaggacgcc
tacggcaactccctctctggcaaacaacgccagaagatgcagcgtctccgcaagtggaac
gagcggttccgcactcgcgactccaaggagcgcaacctcaagcaggccctcggtgaaatc
gaccgtatggcctccgcgctcggactgccagaaaacgtccgcgagacggccagcgtcatc
taccgccgcgcgctggacgaggacctgctccccggccgctccatcgagggcgtctcgacg
gcctccgtctacgccgccgcccgacaggctggcgtcccacgctcgctcgacgagattacg
gaggtctcccgcgtcgagaagagcgaaatcgcccggacctaccgctacgtcgtccgcgaa
ctctcgctcgaagtccgccccgcggaccccgagagctacgtcccgcggtttgcctcctcg
ctggaactgtctgacgaggccgaacaccgcgcccgccagctcctccagaacgccaaggaa
cagggcgtccactccggcaagtccccggtcggcctcgccgccgccgcagtgtacgcggcc
gccctgctgaccaacgagaagacgacccaggctgccgtctccgaggtcgccgacatctcc
gaggtcaccatccgcaaccgctaccacgaactgctggaagccgagcaggacctccccgtc
gcgtaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (12)   
   Pfam (12)   
All databases (20)   

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