KEGG   Candidatus Pantoea carbekii: HHS_07280
Entry
HHS_07280         CDS       T02865                                 
Symbol
clpA
Name
(GenBank) ClpA protein
  KO
K03694  ATP-dependent Clp protease ATP-binding subunit ClpA
Organism
hhs  Candidatus Pantoea carbekii
Brite
KEGG Orthology (KO) [BR:hhs00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03110 Chaperones and folding catalysts [BR:hhs03110]
    HHS_07280 (clpA)
Chaperones and folding catalysts [BR:hhs03110]
 Heat shock proteins
  HSP100
   HHS_07280 (clpA)
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 AAA ClpB_D2-small AAA_5 Clp_N AAA_16 TniB AAA_22 Sigma54_activat ResIII AAA_7 AAA_14 RuvB_N AAA_18 IstB_IS21 nSTAND3 RsgA_GTPase AAA_6 AAA_3 DUF815 hAT-like_RNase-H DNA_pol_A_exo1
Other DBs
NCBI-ProteinID: BAO00698
UniProt: U3U9S8
Position
complement(1011308..1013548)
AA seq 746 aa
MLSQELELTLNIAFASACQHRHEFMTIEHLLLVLLNNPSVKKVLEACTVDIMTMRHELEI
FIEHTTPLFPATNKECNTQPTLGFQRVLQRAIFNVRTSGSKEVSGANVLIAIFSEQESQA
AYLLKKHEVNPFDIANLVFPGKINNKLNSLCSDTKRFIKKKQVKMEKYIEKFTTNLNHLA
HIDHIDPLIVRDKELERTIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVRNEIQEVM
QKCIVYSLDIGALLSGTKYRGDFEKRFKILLKQMEFDKQSILFIDEIHTIIGTGSASGSQ
LDIANFIKPLLSSGKIRIIGSTTYQEFRNLFEKDRVLARRFQKIDILEPSLEETVQILNG
LKSKYETHHNVRYTSKSLRAAVELAVKYINGRYLPDKAIDIIDEAGACSRLLPATRRRKI
IHVSDIERVVAHIARVPQQSVSASDRDRLKNLSSRLKKLVFGQDKAIEALTEAIKVSRAG
LRQEYKPVGSFLFAGPTGVGKTEVTVQLSKALDMKLLRFDMSEYMERHSISRLIGTSPGY
IGFDNGGYLTDAIIKNPYSVLLLDEIEKAHPDIFNLMLQVMDYGILTDNNGRKADFRNVV
LVMTTNAGAYEAERNSIGLVKQNCSVDTIAEIKKIFLPEFRNRFDSIIWFEHLSIEVIYQ
VVDKFIVELQSQLNKKGVFLQVSQNARSWLAEMGYDRTMGARPMSRIVQENLKQPLANEL
LFGSLVKGGSVSIDLDKNKNQLTYLF
NT seq 2241 nt   +upstreamnt  +downstreamnt
atgctcagtcaagaattggaactcactttaaatatagctttcgctagcgcgtgtcagcat
cgccatgaatttatgacaatcgagcatttattattagttttactaaataatccatcggtt
aaaaaagttttagaagcctgtacagtggatattatgactatgcgacacgaacttgaaatt
tttattgagcatactacaccattgttcccagcaactaacaaagaatgtaatacacaacca
acactcggttttcaacgtgtattacagagagcaatttttaacgttcgtacatccggaagc
aaagaagtttccggagcaaatgtactaattgcaattttcagcgaacaagaatcacaagct
gcttatttgcttaaaaaacatgaagtaaacccttttgatatagctaatcttgtgtttcct
ggtaaaattaacaataagttaaattcattgtgtagtgatacaaaacgctttattaaaaaa
aaacaagtaaagatggaaaagtatatagaaaagtttacaactaatcttaatcaccttgct
catattgaccatattgatccgttaatcgttcgcgataaagaattagaacgtactattcaa
gtattatgccgtcgtcgtaaaaataatccattactagtaggtgaatctggtgtaggtaaa
actgcaattgctgaaggacttgcttggcgtatagtgcgtaatgagatacaagaagtaatg
caaaaatgtattgtatattctcttgatataggagcattattatcaggtactaaataccgt
ggtgattttgaaaaacgttttaaaattctattaaaacaaatggaatttgataaacaaagt
attttgtttattgatgaaattcatactattataggaacgggttcggcatcaggtagtcaa
ctagatatagcaaattttattaaaccattactgtctagtggtaaaattcgcataattgga
tccaccacttatcaagaatttcgaaatctttttgaaaaagatagagtattagctcgtcgt
tttcaaaaaattgatattcttgaaccttctctagaagagacagtacaaattcttaatggc
ttaaaatcaaaatatgaaacgcatcataatgtacgttatacttcaaaatcattacgtgca
gctgtagaattagcagtaaaatatattaacgggcgttatttacctgataaagcaatagat
attattgatgaagcaggcgcgtgttcacgtttactaccggctactcgacgtagaaaaatt
attcatgtttcggatattgaaagagtagtagcacatattgcgcgtgtcccacagcaaagt
gtatcagctagtgatcgtgatagactaaaaaatttaagtagtcgattaaaaaaattagta
tttggtcaagataaagctattgaagcattaactgaagctatcaaggtaagtcgtgccggt
cttagacaagaatataaaccagttggatcgtttctatttgctggtccgacaggcgtagga
aaaactgaagtgacagtacagttgtcaaaggcactagatatgaaattattgcgttttgat
atgtctgaatatatggaacgtcatagtattagtcgcctaattggtacatctccgggttat
attggtttcgataatggaggataccttactgatgctataattaaaaatccatattcagtg
ttattattagatgaaattgaaaaagctcatccggatatttttaatttaatgctacaagtt
atggattatggtatattaacagataataatggtcggaaagctgattttcgcaatgtagta
cttgtaatgactactaatgctggagcatatgaagctgaacgcaattctattggattagtt
aagcaaaattgtagcgtagatacaatagcagagattaaaaaaattttcctgcctgaattt
cgtaaccgttttgatagtattatctggtttgagcatctttcaatagaagtcatttatcaa
gttgtagataagtttatcgtagaattacagtctcagcttaataaaaaaggtgttttttta
caagtaagtcaaaatgctcgtagttggttggctgaaatgggttatgatagaactatggga
gcacgccccatgtcacgtatagtgcaagaaaatttgaaacaaccgctcgcaaacgaatta
ctatttggttcattagtaaaaggtggttctgtatcaatagatttagataaaaataaaaat
caattaacatatttattttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (23)   
   Pfam (23)   
All databases (30)   

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