KEGG   Herbaspirillum hiltneri: F506_00470
Entry
F506_00470        CDS       T04039                                 
Name
(GenBank) DNA-binding protein
  KO
K03530  DNA-binding protein HU-beta
Organism
hht  Herbaspirillum hiltneri
Brite
KEGG Orthology (KO) [BR:hht00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hht03032]
    F506_00470
   03036 Chromosome and associated proteins [BR:hht03036]
    F506_00470
   03400 DNA repair and recombination proteins [BR:hht03400]
    F506_00470
DNA replication proteins [BR:hht03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    F506_00470
Chromosome and associated proteins [BR:hht03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    F506_00470
DNA repair and recombination proteins [BR:hht03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      F506_00470
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_bac_2 HU-DNA_bdg HU-CCDC81_euk_2 BclA_C PT-TG TBPIP
Other DBs
NCBI-ProteinID: AKZ61337
Position
complement(112699..112983)
AA seq 94 aa
MNKSELVDAIAADTEISKAAAQRALDSVVENIIKAVTKGDTVQLVGFGSFSTGKRAARTG
RNPQTGEEIKIAAATTVKFSAGKSFKEAVNKKKK
NT seq 285 nt   +upstreamnt  +downstreamnt
gtgaacaaatccgaattggtcgatgcaatcgctgctgatactgaaatctcgaaggctgct
gcacaacgtgccctggactccgtcgttgaaaacatcatcaaggcagttaccaagggcgac
acagtgcaactggtcggtttcggttctttctccacaggcaagcgcgctgctcgtaccggc
cgtaacccacaaactggcgaagagatcaagatcgctgctgcaactacagtgaagttctcc
gctggtaagtcgttcaaagaagcagtgaacaagaagaagaaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (8)   
   Pfam (8)   
All databases (16)   

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