KEGG   Haliscomenobacter hydrossis: Halhy_2199
Entry
Halhy_2199        CDS       T01491                                 
Name
(GenBank) DNA-(apurinic or apyrimidinic site) lyase
  KO
K10563  formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
hhy  Haliscomenobacter hydrossis
Pathway
hhy03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:hhy00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    Halhy_2199
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hhy03400]
    Halhy_2199
Enzymes [BR:hhy01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     Halhy_2199
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Halhy_2199
DNA repair and recombination proteins [BR:hhy03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     Halhy_2199
SSDB
Motif
Pfam: Fapy_DNA_glyco H2TH NFACT_N
Other DBs
NCBI-ProteinID: AEE50081
UniProt: F4KT11
Position
complement(2854027..2854803)
AA seq 258 aa
MPELPEVNTFQRYFDESALQQRIARVDVHDDKIIRNMDGASFAERLHGRTFTGSYRRGKY
LFAQLDNGHHVLLHFGMTGDIKYYEDPIDKPKHERFAFVFDNGFQLGFDDPRKFARILYL
EDLQAYIDSLPLGEDALRISEADFLQLISNKKGQLKAFLLQQQNLAGVGNLYADELCYQT
RIHPAARIESLSLEDKKLLFTTLQKILNYAVERRAYYKDYPEDWLWQWRVEGFVPPDGKG
VVRKGTIAGRTTYFLSEN
NT seq 777 nt   +upstreamnt  +downstreamnt
atgcccgaactgcccgaagtcaacaccttccaacgctactttgacgaaagcgctttacag
cagcgcattgcccgggtagacgtgcacgacgacaagattatccgcaacatggatggtgcc
agctttgcggagcggctgcatggacggacgtttacgggctcttaccgccggggcaaatac
ctctttgctcagctggacaatggccaccacgtgttgctgcattttgggatgacaggcgac
atcaaatactacgaggatcccatagacaaacccaaacacgagcgttttgcctttgttttt
gacaatggttttcagttgggtttcgacgacccacgcaaatttgcccgcattttgtacctg
gaagacctgcaagcctacatcgactccttacccctgggagaggatgccctgcgcatcagc
gaagccgattttctacaactgatcagcaacaaaaaaggccagctcaaagcatttttgctg
cagcaacaaaacctggcgggcgtaggcaatttgtatgccgatgaactttgttaccaaacc
cgtattcaccccgcagcgcggattgaaagtttgtcattggaagataaaaaactgcttttt
actaccctgcaaaaaatcctcaattacgccgtcgaacgccgggcctattacaaagattac
cccgaagattggttgtggcaatggcgggtagaaggttttgtaccacccgatggaaaagga
gtagtgaggaagggaacgattgcggggcggacgacttattttttgagtgaaaattga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (20)   

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