KEGG   Hyphomicrobium nitrativorans: W911_09495
Entry
W911_09495        CDS       T02943                                 
Name
(GenBank) channel protein TolC
  KO
K12340  outer membrane protein
Organism
hni  Hyphomicrobium nitrativorans
Pathway
hni01501  beta-Lactam resistance
hni01503  Cationic antimicrobial peptide (CAMP) resistance
hni02020  Two-component system
hni03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:hni00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    W911_09495
  09132 Signal transduction
   02020 Two-component system
    W911_09495
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01501 beta-Lactam resistance
    W911_09495
   01503 Cationic antimicrobial peptide (CAMP) resistance
    W911_09495
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:hni02000]
    W911_09495
   02044 Secretion system [BR:hni02044]
    W911_09495
   01504 Antimicrobial resistance genes [BR:hni01504]
    W911_09495
Transporters [BR:hni02000]
 Other transporters
  Pores ion channels [TC:1]
   W911_09495
Secretion system [BR:hni02044]
 Type I secretion system
  alpha-Hemolysin/cyclolysin transporter
   W911_09495
  RTX toxin transporter
   W911_09495
  Multiple protein transporter
   W911_09495
  RaxAB-RaxC type I secretion system protein
   W911_09495
Antimicrobial resistance genes [BR:hni01504]
 Gene sets
  Multipdrug resistance modules
   Multidrug resistance, efflux pump AcrEF-TolC [MD:M00696]
    W911_09495
   Multidrug resistance, efflux pump MdtEF-TolC [MD:M00697]
    W911_09495
SSDB
Motif
Pfam: OEP
Other DBs
NCBI-ProteinID: AHB48569
UniProt: V5SF34
Position
1968258..1969661
AA seq 467 aa
MAVTGVGLYPVYAARAETLNEALASAYQYNPRLDAERARLRATDEEVTRARSGFRPRITG
SADINWQHNRTRTVGVPGSTHNDFSPKGYGVDFVQPIFSGFRVINAVNESEANVRAARET
LRGVEQFVLLEAVTAFMDVVRDQAIVRLRENNVNVLTRELRATEDRFGVGEVTRTDVAQA
QARRAGSVSALDLAKANLQTSRGSYERVIGHAPNNLVEPNGYQHAIPGSLQEAIDIGTHE
NPVVVGALYLEQAARFGVDRIRGELLPTVQLEAFYQDRFDTSPITRESETAAVTGRLTVP
IYEGGEVYARVRQQKHIHVSRLQEIEQARSEAEAEVVATWSQLLAARAQVESDQSQVQAN
TTALTGVREEERVGQRTLLDVLNAEVELLNSQVQLVSTRRNVVVSSYAVLSALGRLDAIN
LGFTSVAYDPEAHYQEVRRKPWGTSITHSDGRTEELSGESDWAAGVK
NT seq 1404 nt   +upstreamnt  +downstreamnt
gtggccgtgacaggcgttgggctgtatccggtctatgccgcgcgtgcggaaacgctgaac
gaggcacttgcctcggcctaccagtataatccacgtctcgatgccgagcgggcccgcttg
agagccacggacgaagaggtgacccgcgcgcggtccggcttccggccaaggatcaccggc
agcgccgacatcaactggcagcataaccgcacccgtacggtcggcgttccgggaagcacg
cacaacgacttcagcccgaaggggtatggggtcgatttcgtgcagcccatttttagcggt
ttccgtgtcatcaacgcggtcaacgagtcggaagcgaacgtgcgtgccgcgcgtgagacg
cttcgtggcgtcgagcagttcgtcctgcttgaggcggtcacggctttcatggacgtcgtg
cgcgaccaggccatcgtccggctgcgcgagaacaacgtcaacgtcctgacgcgcgagctg
cgcgcgaccgaagatcgcttcggggtgggcgaggtgacacgcaccgacgtggcgcaagca
caggctcgtcgcgcaggttccgtctccgcgctcgatctcgcgaaggcgaatcttcagacg
agccgcggatcctacgagcgcgtcatcggtcatgcgccgaacaatctggtggagcccaac
ggataccagcacgccattccgggctcgctccaggaagcgatcgatatcggaacgcatgaa
aatcccgtcgtggtgggtgcgctctacctcgaacaggctgcgcggttcggcgtcgatagg
attcgtggcgagttgcttccgacggtgcagctcgaagcgttctatcaggatcggttcgat
acctcgcccatcacgcgcgaatccgaaaccgccgccgtgacgggccgcctgacggtgccg
atctacgaaggcggcgaggtctatgcgcgcgtccgtcagcagaagcacattcacgtcagc
cgtttgcaggaaatcgagcaggcgcggagcgaggccgaagcggaagtggtggccacgtgg
tcgcagcttctcgcggcgcgggcgcaggtggaatccgatcagtcacaggtgcaggccaat
accaccgctctgacgggggttcgcgaggaagagcgcgtcggtcagcgcacacttctcgac
gtgcttaacgccgaggtcgaacttttgaactcgcaggtgcagctcgtgtctacgcgccgc
aacgtggtggtgtcgagctacgccgttctctccgcgctgggccgcctggacgcaataaat
ctcggctttacttcggtcgcctacgatcctgaagcgcattatcaagaagtgcgccgtaag
ccttggggtacctcgattacccactccgacggacgcacggaagagttgtccggcgagtcc
gattgggcggcaggcgtaaaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (7)   
   KEGG PATHWAY (4)   
   KEGG MODULE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (17)   

Download RDF
DBGET integrated database retrieval system