KEGG   Glaesserella parasuis KL0318: JT17_01245
Entry
JT17_01245        CDS       T03312                                 
Name
(GenBank) polynucleotide phosphorylase/polyadenylase
  KO
K00962  polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
Organism
hpak  Glaesserella parasuis KL0318
Pathway
hpak03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:hpak00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    JT17_01245
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hpak03019]
    JT17_01245
   03016 Transfer RNA biogenesis [BR:hpak03016]
    JT17_01245
Enzymes [BR:hpak01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.8  polyribonucleotide nucleotidyltransferase
     JT17_01245
Messenger RNA biogenesis [BR:hpak03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     JT17_01245
Transfer RNA biogenesis [BR:hpak03016]
 Prokaryotic type
  tRNA degradation factors
   JT17_01245
SSDB
Motif
Pfam: RNase_PH RNase_PH_C PNPase S1 KH_1 KH_2 S1_2 SLS1_KH2 aRib
Other DBs
NCBI-ProteinID: AIK89462
Position
214392..216521
AA seq 709 aa
MTPIVKQFKYGQHTVTLETGAIARQATAAVMASMDDTTVFVTVVAKKEVNEGQDFFPLTV
DYQERTYAAGRIPGGFFKREGRPSEGETLIARLIDRPVRPLFPEGFFNEIQVIATVVSVN
PQISPDLVAMIGASAALSLSGVPFNGPIGAARVGFIDNQFVLNPTTSEQRLSRLDLVVAG
TDKAVLMVESEADILTEEQMLAAVVFGHEQQQVVIENIKEFVKEAGKPRWDWVAPEPNTD
LINKVKALAEARLGDAYRITEKQARYEQIDAIKADAIAQLTAEDETISSGKIVDIITALE
SQIVRSRIIAGEPRIDGRTVDTVRALDICTGVLPRTHGSALFTRGETQALAVATLGTERD
AQIIDELTGEKSDRFLFHYNFPPYSVGETGRIGSPKRREIGHGRLAKRGVLAVMPTAEEF
PYVVRVVSEITESNGSSSMASVCGASLALMDAGVPIKAAVAGIAMGLVKEEEKFVVLSDI
LGDEDHLGDMDFKVAGTREGVTALQMDIKIEGITPEIMRIALNQAKGARMHILGVMEQAI
PAPRSEISDFAPRIHTMKIDPKKIKDVIGKGGATIRALTEETGTSIDIDDDGTVKIAATD
NNAAKRVMERIEEIVAEVEVNAIYKGKVTRVVDFGAFVSILGGKEGLVHISQITDARVER
VADYLSVGQDVQVKVVEIERQGRIRLTMKDLNGDATAREVVEEIQELAE
NT seq 2130 nt   +upstreamnt  +downstreamnt
atgactccaatcgttaaacaatttaaatacggtcagcataccgtaactttagaaacaggg
gctattgctcgtcaagcaacagcagcagtaatggcaagtatggacgatacgacggttttt
gttaccgttgtggcaaaaaaagaggtgaatgaaggccaagacttcttcccattaactgta
gattatcaagagcgtacttacgcagcaggccgcattccaggtggtttcttcaaacgtgaa
ggtcgtccatctgagggtgaaactttaattgctcgtttaatcgaccgcccagttcgccca
cttttccctgaaggtttcttcaacgaaattcaagtgattgcaacggtggtttctgtcaat
ccacaaatcagcccggatttagtggcgatgatcggtgcttcagctgcattatctttatcc
ggcgtgcctttcaacggcccaatcggtgcagcacgtgttggttttattgataaccaattc
gtcctaaacccaactacatcagaacagcgtttaagccgtttagatttagtggtagctggt
acagacaaagcggtattaatggttgaatctgaagcagatatcttaactgaagaacagatg
ttagccgcagtggtgtttggtcacgaacagcaacaagtggtgattgaaaacatcaaagaa
tttgtgaaagaagcgggcaaaccacgttgggattgggttgctccagagccaaatacagat
ttaatcaataaagttaaagcattagcagaagctcgtctgggcgatgcttaccgtattact
gaaaaacaagcacgttatgaacaaattgacgcaatcaaagctgatgctatcgctcaatta
accgcagaagatgaaaccatttcaagcggcaagattgtagatattattaccgcattagaa
agccaaatcgtgcgtagccgtattatcgcaggcgaaccgcgtattgacggtcgtacagtg
gataccgtgcgtgcattagatatttgcactggcgttttaccacgtactcacggttcagca
ttgtttacccgtggtgaaacacaggcgttagcagttgcgacattaggtacagagcgtgat
gcacaaatcattgacgaattaacaggcgaaaaatcagatcgcttcttattccactacaac
ttccctccatattcagtaggtgaaacaggtcgtatcggttcgccgaaacgtcgtgaaatc
ggtcacggtcgtttagcgaaacgtggtgtgttagcagtaatgccaacggcagaagaattc
ccttatgttgtgcgtgtggtatctgaaattaccgagtcaaacggttcttcatcaatggct
tctgtatgtggtgcttctcttgcgttaatggacgctggtgtgccaattaaagcagctgtt
gcaggtatcgcaatgggcttagtgaaagaagaagagaaatttgtggtactttcagacatt
ttaggtgatgaagaccacttaggcgatatggactttaaagtagcgggtacccgtgaaggt
gtaactgcattacaaatggacatcaaaattgaagggatcacccctgaaattatgcgtatc
gcattaaatcaagcgaaaggtgcgcgtatgcacattttaggcgtaatggaacaagcgatc
cctgcaccacgttcagaaatttctgacttcgcacctcgtattcatacaatgaagatcgat
ccgaagaaaatcaaagatgtgatcggtaaaggtggtgcgacaattcgtgcattaaccgaa
gaaactggcacatcaatcgacattgatgatgacggaacagtgaaaattgcggcaacagac
aacaacgccgcgaaacgtgtgatggaacgtatcgaagagatcgttgcagaagttgaagtc
aatgcgatctacaaaggtaaagtaacccgtgtagtagatttcggtgcattcgtgtctatc
cttggtggtaaagaaggtttagtgcatatttctcaaatcactgacgctcgtgtagaacgt
gttgcggattacctatctgttggtcaagacgttcaggtgaaagtggtagaaatcgagcgt
caaggccgtatccgcttaacaatgaaagatctgaatggtgatgcaactgctagggaagtt
gttgaagaaattcaagaattagcagaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (9)   
   Pfam (9)   
All databases (19)   

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