KEGG   Helicobacter pylori J99: jhp_0655
Entry
jhp_0655          CDS       T00020                                 
Symbol
dnaX
Name
(GenBank) DNA POLYMERASE III SUBUNITS GAMMA AND TAU
  KO
K02343  DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
Organism
hpj  Helicobacter pylori J99
Pathway
hpj03030  DNA replication
hpj03430  Mismatch repair
hpj03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:hpj00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    jhp_0655 (dnaX)
   03430 Mismatch repair
    jhp_0655 (dnaX)
   03440 Homologous recombination
    jhp_0655 (dnaX)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hpj03032]
    jhp_0655 (dnaX)
   03400 DNA repair and recombination proteins [BR:hpj03400]
    jhp_0655 (dnaX)
Enzymes [BR:hpj01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     jhp_0655 (dnaX)
DNA replication proteins [BR:hpj03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     jhp_0655 (dnaX)
DNA repair and recombination proteins [BR:hpj03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     jhp_0655 (dnaX)
SSDB
Motif
Pfam: DNA_pol3_delta2 AAA RuvB_N AAA_22 AAA_14 AAA_5 DNA_pol3_gamma3 DEAD AAA_30 AAA_assoc_2 AAA_19 TIP49
Other DBs
NCBI-ProteinID: AAD06231
UniProt: Q9ZLC5
Position
complement(732907..734655)
AA seq 582 aa
MQVLALKYRPKHFSELVGQESVAKTLSLALDNQRLANAYLFSGLRGSGKTSSSRIFARAL
MCKTGPKAVPCDTCIQCQSALNNHHIDIIEMDGASNRGIDDVRNLIEQTRYKPSFGRYKI
FIIDEVHMFTTEAFNALLKTLEEPPSHVKFLLATTDALKLPATILSRTQHFRFKKIPENS
VISHLKTILEKEQVSYESSALEKLAHSGQGSLRDTITLLEQAINYCDNAITESKVAEMLG
AIDRSVLEDFFQSLINQDEARLQERYAILENYETEGVLEEMMLFLKAKLLSPDSYSILLI
ERFFKIIMSSLSLLKEGANASFVLLLLKMKFKEALKLKALDDAIVELEQTPFNQSPSISY
NAPKQEPKSTERIEGREKLEKRERIETPQTPMLSAKDRIFHNLFKQVQTLVYERNYELGA
VFEKNIRFIDFDSQTKTLTWESLATDKDKELLRERFKIVKSIVDGVFGKGENIKIALKHH
LENKSAPEETKEVKEFKFPPLKPKLTTETTAEMQEKETKEAVGKALQTKENDTKEVQENE
TKETKEAQPKEAPTALQEFMANHSNLIEEIKSEFEIKSVELL
NT seq 1749 nt   +upstreamnt  +downstreamnt
atgcaagttttagcgttaaaataccgccccaaacattttagcgagctagtcggtcaagag
agcgtagccaaaacgctttctttagccctagacaaccagcgtttggctaacgcttattta
ttcagcgggttaagaggttcgggtaaaaccagctcttctaggatttttgctagggcttta
atgtgtaaaacagggccaaaggctgtgccttgcgatacttgcatccaatgtcagagcgct
ttaaacaaccaccacatagatattatagaaatggatggggcgtctaatagggggattgat
gatgtccgtaacctcatagagcaaacgcgctacaaaccaagctttgggcgctataaaatc
tttatcattgacgaagtgcatatgttcaccaccgaagcgtttaacgcgcttttaaagact
ttagaagagcctcctagccatgtgaaattccttttagcgacaacggacgctttgaaattg
cccgctaccatactcagccgcacccagcatttcaggtttaaaaaaatccctgaaaattcc
gttatttctcatttaaaaaccattttagaaaaagaacaagtgagctatgaaagtagcgcg
ttagaaaaactcgctcacagcgggcaagggagtttgagggatacgatcactcttttagaa
caagccatcaattattgcgataacgctatcacagaaagcaaagtggctgaaatgttaggg
gcgattgaccgaagcgttttggaagatttttttcaaagcctaatcaaccaagatgaagcg
cgattgcaagagcgttatgccattttagaaaattatgaaaccgagggcgttttagaagaa
atgatgctttttttgaaagcgaaattattaagccctgattcttattccattcttttgata
gagcgcttttttaaaatcattatgagcagtctcagccttttaaaagaaggggcaaatgcc
agttttgtgctgttgttattgaaaatgaaattcaaagaagctttgaaactcaaagcccta
gacgatgcgattgtagaattagagcaaacccctttcaatcaaagccctagcataagctat
aacgcccctaaacaagaacccaaaagcacagaaagaatagagggaagagaaaaactagaa
aaaagagaaagaatagaaaccccacaaactcccatgctttcagctaaagatcgtattttt
cacaaccttttcaaacaagtccaaacattggtttatgagcgcaattacgagttaggggct
gtgtttgaaaaaaatatccgtttcattgattttgacagccagactaaaaccttgacttgg
gagtctttggccactgataaggacaaagagcttttaagagaacgatttaaaatcgtgaaa
agtatcgttgatggggtttttggcaagggcgaaaatatcaaaatcgctttaaaacatcat
ttggaaaataaaagcgctccagaagaaactaaagaagttaaagagtttaaattcccccct
ttaaagcccaaactaaccaccgaaacgacggctgaaatgcaagaaaaagaaactaaagaa
gcggttggaaaagcgcttcaaacgaaagaaaacgacactaaagaggttcaagaaaacgaa
actaaagagactaaagaagcccaacccaaagaagccccaacagcgttgcaagaatttatg
gctaaccactctaatctcattgaagagattaagagcgagtttgaaatcaaaagcgtggaa
ttgttatga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (12)   
   Pfam (12)   
All databases (25)   

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