KEGG   Helobdella robusta: HELRODRAFT_191188
Entry
HELRODRAFT_191188 CDS       T03272                                 
Name
(RefSeq) hypothetical protein
  KO
K14297  nuclear pore complex protein Nup98-Nup96
Organism
hro  Helobdella robusta
Pathway
hro03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:hro00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    HELRODRAFT_191188
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hro03019]
    HELRODRAFT_191188
   03036 Chromosome and associated proteins [BR:hro03036]
    HELRODRAFT_191188
Messenger RNA biogenesis [BR:hro03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     HELRODRAFT_191188
Chromosome and associated proteins [BR:hro03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    HELRODRAFT_191188
SSDB
Motif
Pfam: Nup96 Nucleoporin2 Nup98_GLEBS Nucleoporin_FG
Other DBs
NCBI-GeneID: 20211851
NCBI-ProteinID: XP_009014861
JGI: Helro1_191188
UniProt: T1FSQ4
Position
Unknown
AA seq 1935 aa
MFGSKPTTGLFGGTGTANTSFGSTSFGAPSTPFGGGNVGFGSSTFGTPAQTGGGMFGQQS
TSTAGLFGGASSFGATNTASTPFGGFGAGVQTSNTSSSGLFGGTTSTAFGTPSLFGQPAQ
QAQPATGFGQAAGLNMFGLGSQQTGTTVKFVATPGTDIMMKSGISTNVSTKLQCITAMKE
YENKSLEELRLEDYNANRKSGLVMNVGFGSTAASGGGFMGASSQQQQQQTSSFGLFGNQN
KPTFSGFGTPSAANNTSLFGASQQAKPLFGAPATVTSASNAFGGLAGGNLFGNASKPGGL
FGAAAATTTTQSLGFFGNSQPAGNTGFGLTNQNNMGGLFGGNKIGFGQPTTTTAPGFGFA
APQLNQSTLGGPFGTGNLFNKPATTTVSGFGVNAQAPTLFGGFNNPTSNATQFGSLGAST
GTSLFGQQKPAGSLFGNNTGFASNTNALGGTGAGTNSLLGGGSLGGTFGSSSFNIFGSQS
QQQPLNADAALIQQKQQIQQHIQALNTSPYGDSPLFKNLKKDDMLRPTNAEAQKAVIISQ
LSNSTPGLILSGGGNHRLAIKTKPLQMQTFSGGKYNLFDELDQDENSQAASTLAPSASAA
ATAERFVPRRNFKQLNIKAIMEQQQASNTSKEAASSKCSTQNSSSVVFELNTSTGKPVNV
SSEKVDSEGVNNTMAELLSKNRNVLEVSDNNDDKHSNSTDHSENYQVKENRLPHPAGVVL
TRPDYFTLPTLDEMVEVIDQDGRCIVDDFVIGREGYGNIFFPGKIDVTNLNLDEIVFFRR
KEVEVYPVESSKPPVGEGLNRTAQVTLDRVFPVDKTTGELITDYTRLVAMGYMDKLERNA
VKMNAKFVEYRPTTGSFVFIVNHFSKYTVADDDSDDDAVLAKQLPKDPNTLQQPQQLQTL
MSTATTTTVQSADYFKQQQNKPIFTTNQQTQQLFLRDLDEVEMEKAEESDDIENDMMDYE
KKDEAKLLRPKAKRLYDDNDDIEESSDKKNKQTDDVDEEDDTDFYGYNKENTFPSYQMLR
NISAHSIQLQKASFFWDNDNLGDDEEEGDVRKIKMAAAKMKDVIGGTADSKSLSKPAQLL
KEFVSSREKDDDNFGSESMMKINTSGKQNQKLQPLPSPAPQMPYRSPHPIICCMELPDDS
DKKLVEIFRKNRQNLVSKVSLKSCFPGAVDRTLTDISLYQRGATRVGWQKGRWSFCHSSL
PVTSLEENDNEVSLSAKLMHERTRQTEANIKTHNLPTILHEQIIVPGSKDQNVDRMAILE
QCLSTELNHCKVLRSDDDILHERSHIHDHSADIHMEDDEDNSDGQPRKTLTDPSLIDCPF
VSFAHDAQSLMNELVDRLKSSEAQSHWTKVMLSALELCLVLWGSLNGPHRNYNDDDDDDA
DVGSQDYYYTQKRRKDRLSAWLSKEVQQKIEEEVQQIYSKKSRSEDDDGQVTYLYMTGRL
MEEAIQSALEVKDYRLAMLISQAIGNDDVRLELKKQLIGWCTTEMDRFISKPRLSICTLL
SGSLVQKTSQEVINCCHQLDWKRCFAMHLWYACPATCLISEALERYDASYRGEEMHGAIS
VAPLPQYLENLGVLQNEDGAPCDVTYHLLKLYCLEDHPLYKLLSPRTFIDDEMDYSGSWH
MMKVLESLRFGNLSTHHHMYICHSYASQLESLGLWWWSVFVLMHITHPLIRKNSVKKVIE
RNVEIMKQRDDEDGEHDDEDDVLLNDKEMFVVDKLKIPAEWLHEAKAIKCQWLNMPHLEA
KHSFLARRYNRYHDIIIGRSVASRIIINDDLRSYLYWLNRLRDGGPCGSLFKEREVATYL
NYMQLLQAVNKMEVVRLDEGGLEDKEILEMRMTLYSDQMAEQLKNFKCNNSTDRLAYMKM
FRVLAKAVNLRSVKTDHDLSVCLIKWKFPLSYDALHCGSLDDVTTHATQSNSDGLCSSYN
SHLQSGDILSALLKA
NT seq 5808 nt   +upstreamnt  +downstreamnt
atgttcggaagtaaacctactaccggattgtttggcgggactggcaccgctaatacatcg
tttggttcaacatcatttggagctcctagtactccttttggggggggaaatgttgggttt
ggttcatcaacttttggtactccagctcagacagggggtggtatgtttggtcagcagtcg
acgagtactgctgggttgtttgggggagcgtccagttttggagccaccaacactgcatca
acaccttttggtggatttggagcaggggtgcaaacatcaaatacaagctcatctggcttg
tttggaggaaccactagcactgcctttgggacaccttcattatttggccagccagctcaa
caagcacagccagcaacagggtttggccaggcagctggtctgaatatgtttgggttaggt
tctcagcagaccgggaccactgtgaagtttgttgccactcctggaaccgatattatgatg
aaatctggcatctcaacaaatgtcagcaccaagctacagtgcattactgcaatgaaagaa
tatgagaataaaagtcttgaggaactgaggctggaagattacaatgcaaacagaaagtca
ggtttggtgatgaatgttggatttggatcaacagctgcaagtgggggtggcttcatgggc
gcttcatcacaacagcagcaacaacaaacaagcagttttggactctttggaaatcagaac
aagccaacattttcaggttttggcacaccatcagcagccaacaacacatcactatttggt
gcatcccaacaagcaaaaccattgtttggagcccctgcaacagttacatctgcctccaac
gcgtttggaggccttgctggtggaaatctctttggaaatgcatcaaaacctggcggtttg
tttggtgcagcagcagcaacgacgacaactcagtcactcggcttctttggaaacagccaa
ccagctggcaacactggttttggccttactaatcaaaataacatgggaggtttgttcgga
ggcaacaaaattggttttggtcagccgaccaccacaacagcaccagggtttggatttgca
gcacctcaactcaatcagtcaacattgggagggccatttggtacaggcaacctcttcaac
aaacctgctactaccacagtttctggtttcggtgttaatgcacaagcaccaacacttttt
ggaggtttcaataatcccacgagcaatgctactcagtttggtagtctgggagcaagcacg
gggacctcattgtttggacagcagaagcctgccggttcattatttggaaataacactggg
tttgcgtccaacacgaatgcactgggtggaacgggtgcagggaccaactctctgctcgga
ggtggctcacttggaggcacatttggatcctcctctttcaacatcttcggcagtcaatcg
cagcagcaaccactgaatgctgatgctgccttaatacaacaaaagcagcagatacaacaa
catatacaagctcttaatacgtcgccatatggagactcaccacttttcaaaaatttaaag
aaggacgatatgttgaggccgacgaatgcagaggctcagaaagcagtcatcatctcgcaa
ctctcaaacagcacgcctggattgatcctctccggtggaggaaaccaccgactggcaata
aaaactaagccattacaaatgcagacattttctggtggaaagtataacttgtttgatgag
ctggatcaagatgagaactcgcaggcagcgtcgacgttggcgccatctgcctctgctgct
gccactgcagagaggttcgtccctcgcagaaatttcaagcaactgaacatcaaggcaatc
atggagcagcaacaggccagcaatacttcaaaagaggctgcctcatcaaaatgcagcact
cagaattccagcagtgtcgtttttgagcttaacacatccactggcaaacctgtgaacgtc
agttctgaaaaagttgatagtgagggcgtcaacaacaccatggctgaactcctatcgaag
aatcgaaacgtactcgaagtttcagacaacaatgatgacaaacattcaaatagtaccgac
catagtgaaaactaccaagtaaaagagaaccgtttgccacatccggcgggagttgtcttg
acacgacccgactacttcaccctcccaactcttgatgaaatggttgaagtgatcgaccag
gatggcaggtgcatcgtggatgattttgtcatcggcagggaaggatacggcaacattttc
tttcctggcaagattgatgtcacaaatcttaacctggatgagatagtgttttttagaaga
aaggaggtggaggtgtaccccgttgaatcaagcaagccaccagtaggcgaggggttgaat
aggacggctcaagtcacgcttgatcgcgtgtttcctgttgacaagaccactggagagctt
ataacagattacactcgtctcgttgccatggggtacatggacaagctggaaagaaacgct
gtaaagatgaatgcgaagtttgttgagtacagaccgactacaggatcgtttgttttcatt
gtgaatcacttttcaaagtatactgtagcagatgatgattctgatgacgatgcggttcta
gcgaagcaacttcccaaagatcctaacacactgcaacaacctcaacaattgcaaacgtta
atgtcaactgcaacgacgacaacagtgcagtcagctgattactttaaacagcagcaaaac
aagccaatcttcacaaccaaccagcaaactcagcagctgttcctcagggatctcgatgag
gtggagatggaaaaggcggaagaaagtgatgacattgaaaatgacatgatggattatgag
aaaaaagatgaggccaaactgttgagaccgaaagccaaaagactttacgatgacaatgat
gatattgaagagagcagtgataagaagaacaagcaaaccgatgatgtcgatgaagaagat
gatactgatttttacggttacaacaaagagaacactttcccatcctaccaaatgctaagg
aacatttccgctcacagcattcaactgcagaaggcatcattcttctgggataacgataat
cttggtgatgatgaggaagagggtgacgtcagaaagattaagatggccgctgcaaagatg
aaggatgtcattggcggaaccgccgatagcaaaagcttatcgaaaccagctcagttgttg
aaggaatttgtttcttcacgagagaaagatgatgataattttgggagcgaatcgatgatg
aagataaacacgtcgggcaaacaaaaccaaaaacttcaaccccttccatctcccgcccct
caaatgccataccgttcacctcatcctattatttgctgcatggaacttccagatgattca
gataaaaaacttgttgaaatattcaggaaaaataggcaaaatttggtttccaaagtgagt
ttaaaatcctgctttccaggcgcagttgacagaacgttaacagatataagcttgtaccag
agaggtgcaacgagggttggctggcaaaaaggtaggtggagtttctgccactcgtcatta
cccgtcacctctctcgaagaaaacgataatgaggttagtttgtcggcaaagttgatgcac
gagagaacaagacagactgaggcgaacatcaagacacacaacttaccaaccatccttcat
gaacaaatcattgtgcccggtagtaaggatcagaatgttgataggatggctatcttagag
cagtgcctttcaacggagctgaatcactgcaaggtacttaggtcggatgatgatatcttg
cacgaaagaagtcacattcacgatcacagtgcagacattcacatggaagatgatgaagat
aactccgatggtcaacctagaaaaacattgacagatcccagtcttattgactgtccattc
gtatcatttgctcatgacgctcaatcactaatgaatgaattggttgatcgattgaaatct
agcgaggctcagtcacattggactaaagttatgttgtcagccctggagttgtgcctggtg
ttgtggggcagtttgaatggtccccatcgaaactacaatgacgacgacgatgatgacgca
gacgttggtagtcaggattattattacactcagaagaggaggaaagataggctgtcagcc
tggctgtccaaggaagttcaacaaaaaattgaggaggaggttcaacaaatttattcaaaa
aagtctagaagtgaggatgatgatggacaggtgacctatttgtatatgactggtcgactg
atggaagaagccatccaatcagctttggaggtcaaagactatcgactggccatgcttatt
tctcaggctatcggtaatgatgatgtgaggctggagttgaagaaacagctgattggctgg
tgtacaaccgagatggatagattcataagcaagcctcgcctttctatctgcacactcctc
tccggcagtcttgttcagaagacttcccaggaagtcatcaactgctgccatcaacttgat
tggaagaggtgctttgccatgcacctctggtatgcctgtccagcgacgtgcttgatatca
gaagcattggaaagatatgatgccagctaccgaggcgaggagatgcacggtgcaatatct
gtagcaccactgccacagtatttggaaaacttgggtgttcttcagaacgaggatggcgcc
ccgtgtgacgtcacctaccatctcttgaagttgtactgtctggaggatcacccgctctac
aaactgctcagtccaaggaccttcatcgatgatgaaatggattacagtggcagttggcac
atgatgaaagtcttggagtccttgcgttttggtaacttgagtacacaccatcacatgtat
atatgccacagctacgccagtcagctggaaagtctcggcctctggtggtggagtgtcttc
gttctcatgcacatcactcatccgcttattcgcaagaatagtgtgaagaaggtgattgaa
cgtaacgttgaaatcatgaagcagagggatgatgaggatggggagcacgatgatgaggac
gacgttctgctgaatgataaggaaatgttcgttgttgacaaactgaagatacctgccgaa
tggcttcatgaggctaaggccatcaaatgtcagtggttgaacatgccccatctcgaagcc
aaacattccttcctagctcgcaggtacaatcgttaccacgacatcatcatcggcaggagt
gtcgcatccagaatcatcatcaacgacgacctccgatcctatttgtactggctgaacagg
ctgagagacggcggaccctgtggctcgctcttcaaggagcgcgaagtagcgacgtacttg
aattacatgcaactcttgcaggcagtcaataaaatggaagtcgttcgtctggatgaagga
ggattggaggacaaggaaattttggagatgagaatgacactctacagtgatcaaatggcc
gaacagctgaaaaatttcaaatgcaacaactccacggacaggttggcctacatgaaaatg
tttagagttcttgctaaggccgttaacttgagatccgtcaaaacagatcacgatttatca
gtatgtttgataaaatggaagtttccactatcgtacgatgcgttgcactgtggaagtctg
gacgatgtgacgacgcacgccacacagtcaaacagcgatggactctgcagcagttacaac
tctcatcttcaatctggcgatattttatcggccttattgaaggcatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (74)   
   KEGG ORTHOLOGY (1)   
   RefGene (69)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (86)   

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