KEGG   Helobdella robusta: HELRODRAFT_78123
Entry
HELRODRAFT_78123  CDS       T03272                                 
Name
(RefSeq) hypothetical protein
  KO
K13116  ATP-dependent RNA helicase DDX41 [EC:5.6.2.7]
Organism
hro  Helobdella robusta
Brite
KEGG Orthology (KO) [BR:hro00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:hro03041]
    HELRODRAFT_78123
Enzymes [BR:hro01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     HELRODRAFT_78123
Spliceosome [BR:hro03041]
 Complex C
  Other components
   Complex C specific factors
    HELRODRAFT_78123
SSDB
Motif
Pfam: DEAD Helicase_C ResIII zf-CCHC
Other DBs
NCBI-GeneID: 20215532
NCBI-ProteinID: XP_009016810
JGI: Helro1_78123
UniProt: T1G384
Position
Unknown
AA seq 602 aa
SDDDYVPYIPVKKRKKQRLEAIKTLATNKSNYMTSKLQKNDNHDGQNDSDTDIATYQMLG
PKSHISLLDQHSQLKLEAQARKETAREKQLKEEEKILESVAEKTALMGVAELAKGIQYGD
SIKTSWKVPKYVLAMPPSRHQRVRDRLRILTEGEDIPPPLKTFQEMKFPKVMIQALKKRG
ILKPTPIQIQGLPAVLSGRDIIGIAFTGSGKTLVFVLPLVMFCLEQEINLPFIRNEGPYG
LIICPSRELAKQTNDIIEYFFNQLASHGQPELRCCLCIGGFPIKDQLETIKRGVHVVVAT
PGRLMDMLDKKMISLSICRYLCLDEADRMIDMGFEEDVRTIFSYFKGQRQTLLFSATMPK
KIQNFARSALVRPVTVNVGRAGAANLDVKQEVEYVKQEEKMPHILNSLQKTLPPVLVFAE
KKQDVDAIHEYLLLRGIDAVSIHGGKDQEERSVSVQQFISGKKDVLVATDVASKGLDFPN
VQHIINYDMPDDIENYVHRIGRTGRCGKTGVATTFVNKTCEESILLDLKHLLIEAKQVVP
EFLATMETETEQYLNIGGEVGCSYCGGLGHRITDCPKLEAIQNKQAQNIGRKDYLASGAA
DW
NT seq 1809 nt   +upstreamnt  +downstreamnt
tctgacgacgactatgtaccttatatacctgttaaaaaaagaaagaagcagagacttgaa
gccatcaaaacattagcaacgaacaaatccaattatatgacgtcaaaattacaaaagaat
gacaaccacgacggccaaaatgacagtgacacagatatcgctacctatcagatgctgggg
ccgaaatctcacatcagtttgctagaccaacatagccagttgaaactagaagcccaagct
cgtaaggaaacggcgagggagaaacagttgaaggaagaggagaagatcctagaaagtgtg
gccgaaaaaacagccctgatgggtgttgctgagttggcgaagggtatccagtatggtgat
tctataaaaactagttggaaggtcccgaaatacgtcctggcgatgcccccgtcgagacac
cagcgcgtcagggaccgacttcgcatactgaccgagggtgaagatatccctccacccctc
aagacgttccaggagatgaaatttccaaaagtgatgatccaagcccttaagaaaaggggc
atattgaagccgacccccattcaaattcagggcctgcctgccgtcctatcgggccgtgac
atcataggcattgcattcaccgggtccggcaaaacactcgtgttcgtgcttcctctggtc
atgttctgcctggaacaggaaatcaatctgccattcatcagaaatgagggaccttatgga
ctgatcatttgtccatcgagggagctggctaaacagacaaacgacataattgagtatttt
ttcaaccagcttgcttcacacggtcagccggagttgaggtgctgtttgtgtattggagga
tttcccatcaaggatcaacttgaaactattaaacgaggtgttcacgtagtcgtggcaaca
ccaggaagactgatggacatgctggacaagaagatgatcagtctgtcaatttgcaggtat
ctgtgcttggatgaagcggacagaatgattgacatgggcttcgaagaagatgtcagaacg
atcttctcatacttcaagggccaacgacagacactcctcttctctgccaccatgcccaaa
aagatccaaaacttcgccaggagtgccctggttcgcccggtcaccgtcaacgtcggtagg
gctggggccgctaacttggacgttaagcaagaggtggagtacgttaaacaggaggaaaaa
atgccacacatattgaactcactgcagaaaacactgcctccggtactggtatttgccgag
aagaaacaggatgtcgacgcaatacacgaatacctgcttctgagaggtatcgacgccgta
tctatacacgggggcaaagaccaagaggagcgctcggtttcagttcaacaattcatcagt
ggcaagaaagatgtccttgtcgctacagatgtcgcttctaaaggtctagacttcccgaac
gtccagcacatcatcaattatgacatgcctgacgacatcgagaactacgtgcaccggatt
ggtcgaacaggcaggtgcggaaagacgggggttgccaccacatttgtcaacaaaacatgc
gaggagtccatattactggatttgaagcacctcctaatcgaagccaaacaagtggtaccg
gaattcttggccaccatggaaacggaaacagagcaatacttaaacatcggaggtgaggtc
ggctgctcgtactgcggtgggttgggccatcgaatcacggactgccccaaactcgaagcc
atacagaacaaacaagcccagaacatcggtagaaaggactacctcgcttctggcgctgcc
gactggtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (54)   
   KEGG ORTHOLOGY (1)   
   RefGene (49)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (65)   

Download RDF
DBGET integrated database retrieval system