KEGG   Homo sapiens (human): 22883
Entry
22883             CDS       T01001                                 
Symbol
CLSTN1, ALC-ALPHA, CDHR12, CST-1, CSTN1, PIK3CD, XB31alpha, alcalpha1, alcalpha2
Name
(RefSeq) calsyntenin 1
  KO
K22659  calsyntenin 1
Organism
hsa  Homo sapiens (human)
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:hsa04515]
    22883 (CLSTN1)
Cell adhesion molecules [BR:hsa04515]
 Cadherins
  Cadherin related
   22883 (CLSTN1)
SSDB
Motif
Pfam: CLSTN_C Cadherin Laminin_G_3 CDC45 Laminin_G_2 EphA2_TM V_ATPase_I SID-1_RNA_chan FAM176 Zip
Other DBs
NCBI-GeneID: 22883
NCBI-ProteinID: NP_001009566
OMIM: 611321
HGNC: 17447
Ensembl: ENSG00000171603
Pharos: O94985(Tbio)
UniProt: O94985
Position
1:complement(9728926..9824526)
AA seq 981 aa
MLRRPAPALAPAARLLLAGLLCGGGVWAARVNKHKPWLEPTYHGIVTENDNTVLLDPPLI
ALDKDAPLRFAESFEVTVTKEGEICGFKIHGQNVPFDAVVVDKSTGEGVIRSKEKLDCEL
QKDYSFTIQAYDCGKGPDGTNVKKSHKATVHIQVNDVNEYAPVFKEKSYKATVIEGKQYD
SILRVEAVDADCSPQFSQICSYEIITPDVPFTVDKDGYIKNTEKLNYGKEHQYKLTVTAY
DCGKKRATEDVLVKISIKPTCTPGWQGWNNRIEYEPGTGALAVFPNIHLETCDEPVASVQ
ATVELETSHIGKGCDRDTYSEKSLHRLCGAAAGTAELLPSPSGSLNWTMGLPTDNGHDSD
QVFEFNGTQAVRIPDGVVSVSPKEPFTISVWMRHGPFGRKKETILCSSDKTDMNRHHYSL
YVHGCRLIFLFRQDPSEEKKYRPAEFHWKLNQVCDEEWHHYVLNVEFPSVTLYVDGTSHE
PFSVTEDYPLHPSKIETQLVVGACWQEFSGVENDNETEPVTVASAGGDLHMTQFFRGNLA
GLTLRSGKLADKKVIDCLYTCKEGLDLQVLEDSGRGVQIQAHPSQLVLTLEGEDLGELDK
AMQHISYLNSRQFPTPGIRRLKITSTIKCFNEATCISVPPVDGYVMVLQPEEPKISLSGV
HHFARAASEFESSEGVFLFPELRIISTITREVEPEGDGAEDPTVQESLVSEEIVHDLDTC
EVTVEGEELNHEQESLEVDMARLQQKGIEVSSSELGMTFTGVDTMASYEEVLHLLRYRNW
HARSLLDRKFKLICSELNGRYISNEFKVEVNVIHTANPMEHANHMAAQPQFVHPEHRSFV
DLSGHNLANPHPFAVVPSTATVVIVVCVSFLVFMIILGVFRIRAAHRRTMRDQDTGKENE
MDWDDSALTITVNPMETYEDQHSSEEEEEEEEEEESEDGEEEDDITSAESESSEEEEGEQ
GDPQNATRQQQLEWDDSTLSY
NT seq 2946 nt   +upstreamnt  +downstreamnt
atgctgcgccgccccgctcccgcgctggccccggccgcccggctgctgctggccgggctg
ctgtgcggcggcggggtctgggccgcgcgagttaacaagcacaagccctggctggagccc
acctaccacggcatagtcacagagaacgacaacaccgtgctcctcgaccccccactgatc
gcgctggataaagatgcgcctctgcgatttgcagagagttttgaggtgacagtcaccaaa
gaaggtgagatttgtggatttaaaattcacgggcagaatgtcccctttgatgcagtggta
gtggataaatccactggtgagggagtcattcgctccaaagagaaactggactgtgagctg
cagaaagactattcattcaccatccaggcctatgattgtgggaagggacctgatggcacc
aacgtgaaaaagtctcataaagcaactgttcatattcaggtgaacgacgtgaatgagtac
gcgcccgtgttcaaggagaagtcctacaaagccacggtcatcgaggggaagcagtacgac
agcattttgagggtggaggccgtggatgccgactgctcccctcagttcagccagatttgc
agctacgaaatcatcactccagacgtgccctttactgttgacaaagatggttatataaaa
aacacagagaaattaaactacgggaaagaacatcaatataagctgaccgtcactgcctat
gactgtgggaagaaaagagccacagaagatgttttggtgaagatcagcattaagcccacc
tgcacccctgggtggcaaggatggaacaacaggattgagtatgagccgggcaccggcgcg
ttggccgtctttccaaatatccacctggagacatgtgacgagccagtcgcctcagtacag
gccacagtggagctagaaaccagccacatagggaaaggctgcgaccgagacacctactca
gagaagtccctccaccggctctgtggtgcggccgcgggcactgccgagctgctgccatcc
ccgagtggatccctcaactggaccatgggcctgcccaccgacaatggccacgacagcgac
caggtgtttgagttcaacggcacccaggcagtgaggatcccggatggcgtcgtgtcggtc
agccccaaagagccgttcaccatctcggtgtggatgagacatgggccattcggcaggaag
aaggagacaattctttgcagttctgataaaacagatatgaatcggcaccactactccctc
tatgtccacgggtgccggctgatcttcctcttccgtcaggatccttctgaggagaagaaa
tacagacctgcagagttccactggaagttgaatcaggtctgtgatgaggaatggcaccac
tacgtcctcaatgtagaattcccgagtgtgactctctatgtggatggcacgtcccacgag
cccttctctgtgactgaggattacccgctccatccatccaagatagaaactcagctcgtg
gtgggggcttgctggcaagagttttcaggagttgaaaatgacaatgaaactgagcctgtg
actgtggcctctgcaggtggcgacctgcacatgacccagtttttccgaggcaatctggct
ggcttaactctccgttccgggaaactcgcggataagaaggtgatcgactgtctgtatacc
tgcaaggaggggctggacctgcaggtcctcgaagacagtggcagaggcgtgcagatccaa
gcacaccccagccagttggtattgaccttggagggagaagacctcggggaattggataag
gccatgcagcacatctcgtacctgaactcccggcagttccccacgcccggaattcgcaga
ctcaaaatcaccagcacaatcaagtgttttaacgaggccacctgcatttcggtccccccg
gtagatggctacgtgatggttttacagcccgaggagcccaagatcagcctgagtggcgtc
caccattttgcccgagcagcttctgaatttgaaagctcagaaggggtgttccttttccct
gagcttcgcatcatcagcaccatcacgagagaagtggagcctgaaggggacggggctgag
gaccccacagttcaagaatcactggtgtccgaggagatcgtgcacgacctggatacctgt
gaggtcacggtggagggagaggagctgaaccacgagcaggagagcctggaggtggacatg
gcccgcctgcagcagaagggcattgaagtgagcagctctgaactgggcatgaccttcaca
ggcgtggacaccatggccagctacgaggaggttttgcacctgctgcgctatcggaactgg
catgccaggtccttgcttgaccggaagtttaagctcatctgctcagagctgaatggccgc
tacatcagcaacgaatttaaggtggaggtgaatgtaatccacacggccaaccccatggaa
cacgccaaccacatggctgcccagccacagttcgtgcacccggaacaccgctcctttgtt
gacctgtcaggccacaacctggccaacccccacccgttcgcagtcgtccccagcactgcg
acagttgtgatcgtggtgtgcgtcagcttcctggtgttcatgattatcctgggggtattt
cggatccgggccgcacatcggcggaccatgcgggatcaggacaccgggaaggagaacgag
atggactgggacgactctgccctgaccatcaccgtcaaccccatggagacctatgaggac
cagcacagcagtgaggaggaggaggaagaggaagaggaagaggaaagcgaggacggcgaa
gaagaggatgacatcaccagcgccgagtcggagagcagcgaggaggaggagggggagcag
ggcgacccccagaacgcaacccggcagcagcagctggagtgggatgactccaccctcagc
tactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Disease (1)   
   OMIM (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (18)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   HGNC (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (2)   
   OC (1)   
   PHAROS (1)   
Protein sequence (7)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (5)   
DNA sequence (31)   
   RefSeq(nuc) (5)   
   GenBank (13)   
   EMBL (13)   
Protein domain (10)   
   Pfam (10)   
All databases (70)   

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