KEGG   Homo sapiens (human): 4928
Entry
4928              CDS       T01001                                 

Gene name
NUP98, ADIR2, NUP196, NUP96, Nup98-96
Definition
(RefSeq) nucleoporin 98 and 96 precursor
  KO
K14297  nuclear pore complex protein Nup98-Nup96
Organism
hsa  Homo sapiens (human)
Pathway
hsa03013  RNA transport
hsa05014  Amyotrophic lateral sclerosis
hsa05164  Influenza A
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 RNA transport
    4928 (NUP98)
 09160 Human Diseases
  09172 Infectious disease: viral
   05164 Influenza A
    4928 (NUP98)
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    4928 (NUP98)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hsa03019]
    4928 (NUP98)
   03036 Chromosome and associated proteins [BR:hsa03036]
    4928 (NUP98)
Messenger RNA biogenesis [BR:hsa03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     4928 (NUP98)
Chromosome and associated proteins [BR:hsa03036]
 Eukaryotic type
  Centrosome formation and ciliogenesis proteins
   Spindle formation proteins
    4928 (NUP98)
SSDB
Motif
Pfam: Nup96 Nucleoporin2 Nucleoporin_FG ANAPC3
Other DBs
NCBI-GeneID: 4928
NCBI-ProteinID: NP_057404
OMIM: 601021
HGNC: 8068
Ensembl: ENSG00000110713
Vega: OTTHUMG00000011846
Pharos: P52948(Tbio)
UniProt: P52948
Structure
PDB: 

Position
11p15.4
AA seq 1800 aa
MFNKSFGTPFGGGTGGFGTTSTFGQNTGFGTTSGGAFGTSAFGSSNNTGGLFGNSQTKPG
GLFGTSSFSQPATSTSTGFGFGTSTGTANTLFGTASTGTSLFSSQNNAFAQNKPTGFGNF
GTSTSSGGLFGTTNTTSNPFGSTSGSLFGPSSFTAAPTGTTIKFNPPTGTDTMVKAGVST
NISTKHQCITAMKEYESKSLEELRLEDYQANRKGPQNQVGAGTTTGLFGSSPATSSATGL
FSSSTTNSGFAYGQNKTAFGTSTTGFGTNPGGLFGQQNQQTTSLFSKPFGQATTTQNTGF
SFGNTSTIGQPSTNTMGLFGVTQASQPGGLFGTATNTSTGTAFGTGTGLFGQTNTGFGAV
GSTLFGNNKLTTFGSSTTSAPSFGTTSGGLFGFGTNTSGNSIFGSKPAPGTLGTGLGAGF
GTALGAGQASLFGNNQPKIGGPLGTGAFGAPGFNTTTATLGFGAPQAPVALTDPNASAAQ
QAVLQQHINSLTYSPFGDSPLFRNPMSDPKKKEERLKPTNPAAQKALTTPTHYKLTPRPA
TRVRPKALQTTGTAKSHLFDGLDDDEPSLANGAFMPKKSIKKLVLKNLNNSNLFSPVNRD
SENLASPSEYPENGERFSFLSKPVDENHQQDGDEDSLVSHFYTNPIAKPIPQTPESAGNK
HSNSNSVDDTIVALNMRAALRNGLEGSSEETSFHDESLQDDREEIENNSYHMHPAGIILT
KVGYYTIPSMDDLAKITNEKGECIVSDFTIGRKGYGSIYFEGDVNLTNLNLDDIVHIRRK
EVVVYLDDNQKPPVGEGLNRKAEVTLDGVWPTDKTSRCLIKSPDRLADINYEGRLEAVSR
KQGAQFKEYRPETGSWVFKVSHFSKYGLQDSDEEEEEHPSKTSTKKLKTAPLPPASQTTP
LQMALNGKPAPPPQSQSPEVEQLGRVVELDSDMVDITQEPVLDTMLEESMPEDQEPVSAS
THIASSLGINPHVLQIMKASLLTDEEDVDMALDQRFSRLPSKADTSQEICSPRLPISASH
SSKTRSLVGGLLQSKFTSGAFLSPSVSVQECRTPRAASLMNIPSTSSWSVPPPLTSVFTM
PSPAPEVPLKTVGTRRQLGLVPREKSVTYGKGKLLMDMALFMGRSFRVGWGPNWTLANSG
EQLNGSHELENHQIADSMEFGFLPNPVAVKPLTESPFKVHLEKLSLRQRKPDEDMKLYQT
PLELKLKHSTVHVDELCPLIVPNLGVAVIHDYADWVKEASGDLPEAQIVKHWSLTWTLCE
ALWGHLKELDSQLNEPREYIQILERRRAFSRWLSCTATPQIEEEVSLTQKNSPVEAVFSY
LTGKRISEACSLAQQSGDHRLALLLSQFVGSQSVRELLTMQLVDWHQLQADSFIQDERLR
IFALLAGKPVWQLSEKKQINVCSQLDWKRSLAIHLWYLLPPTASISRALSMYEEAFQNTS
DSDRYACSPLPSYLEGSGCVIAEEQNSQTPLRDVCFHLLKLYSDRHYDLNQLLEPRSITA
DPLDYRLSWHLWEVLRALNYTHLSAQCEGVLQASYAGQLESEGLWEWAIFVLLHIDNSGI
REKAVRELLTRHCQLLETPESWAKETFLTQKLRVPAKWIHEAKAVRAHMESDKHLEALCL
FKAEHWNRCHKLIIRHLASDAIINENYDYLKGFLEDLAPPERSSLIQDWETSGLVYLDYI
RVIEMLRHIQQVDCSGNDLEQLHIKVTSLCSRIEQIQCYSAKDRLAQSDMAKRVANLLRV
VLSLHHPPDRTSDSTPDPQRVPLRLLAPHIGRLPMPEDYAMDELRSLTQSYLRELAVGSL
NT seq 5403 nt   +upstreamnt  +downstreamnt
atgtttaacaaatcatttggaacaccctttgggggtggcacaggtggctttggcacaact
tcaacatttggacagaatactggctttggcactactagtggaggggcatttggaacatct
gcatttggttctagcaacaatactggaggcctctttggaaattcacagactaaaccagga
ggattgtttggaaccagttcatttagccagccagctacctccacaagcactggctttggg
tttggtacgtcaacaggaacagcaaataccttgtttggaactgcaagcacagggaccagt
ctcttctcatcccaaaacaatgcctttgcacaaaataaaccaactggctttggcaatttt
ggaaccagtactagcagtggaggactctttggaaccacaaataccacctctaatcctttt
ggcagcacatctggctccctctttgggccaagtagttttacagctgctcctactgggact
actattaaatttaaccctccaactggtacagatactatggtcaaagctggagttagcact
aacataagtaccaagcaccagtgtattactgctatgaaagaatatgaaagcaagtcacta
gaggaacttcgtttagaggattatcaggctaacaggaagggcccacagaaccaggtggga
gcaggtaccacaactggcttgtttgggtcttctccagccacttccagcgcaacaggactc
ttcagctcctccaccactaattcaggctttgcatatggtcagaacaaaactgcctttgga
actagtacaactggatttggaacaaatccaggtggtctctttggccaacagaatcagcag
actaccagcctcttcagcaaaccatttggccaggctacaaccacccagaacactggcttt
tcctttggtaataccagcaccataggacagccaagcaccaacaccatgggattatttgga
gtaacccaagcctcacagcctggaggtctttttgggacagctacaaacaccagcactggg
acagcatttggaacaggaacaggtctctttgggcagaccaatactggatttggtgctgtt
ggttcgaccctgtttggcaataacaagcttactacatttggaagcagcacaaccagtgca
ccttcatttggtacaaccagtggcgggctctttggttttggcacaaataccagtgggaat
agtatttttggaagtaaaccagcacctgggactcttggaactgggcttggtgcaggattt
ggaacagctcttggtgctggacaggcatctttgtttgggaacaaccaacctaagattgga
gggcctcttggtacaggagcctttggggcccctggatttaatactacgacagccactttg
ggctttggagccccccaggccccagtagctttgacagatccaaatgcttctgctgcccag
caggctgttctccagcagcacatcaatagtctaacatactcaccttttggagactctcct
ctcttccggaatccgatgtcagaccctaagaagaaggaagagagattgaaaccaacaaat
ccagcagcccagaaggctcttactacacctactcattataaactgacaccccgccctgcc
actagagtccggccaaaggctttacaaacaacaggcacagccaagtcacatctctttgat
gggctggatgacgatgaaccatccctagccaatggagcattcatgcccaagaagagcatt
aagaagttggttttgaagaaccttaataatagcaatctcttttctcctgttaatcgtgat
tcagaaaatctagcttcaccatctgaatatccagaaaatggagagagatttagtttccta
agcaaacctgttgatgagaatcaccagcaggatggagatgaagattcccttgtttcacat
ttttatactaaccctattgccaaacctattcctcaaaccccagaaagtgctggaaataaa
cacagcaacagcaacagtgtggatgataccattgttgcattaaacatgcgtgctgctttg
cgaaatgggctggaaggaagcagtgaagaaacgtcttttcatgatgagtcacttcaggat
gaccgagaagaaatagaaaataattcttaccatatgcacccagcaggtattattctcact
aaggttggttactatactattccatctatggatgaccttgctaaaattaccaatgaaaaa
ggagagtgcattgtctctgatttcactattggtcggaaaggttatggttcaatctatttt
gaaggagatgtgaatttgacaaatctaaatttggatgatattgtgcatatccggaggaaa
gaagtagttgtctacttagatgataaccaaaaaccacctgtgggtgaagggctaaatagg
aaggctgaagttacattggatggagtttggccaacagataaaacatctcgttgtttaata
aagagcccagatcgccttgctgatatcaactatgaaggaagattggaagcagtttcaagg
aaacagggagctcaattcaaagaataccggcctgaaactggttcttgggtgtttaaggtc
tcccatttttctaagtatggccttcaggattctgatgaagaggaggaggagcatccgtct
aaaactagtacaaagaagttgaagactgctcctttgcctcctgcaagccagactacgccc
ttgcagatggctcttaatggcaaacctgcacctccacctcagagccagagcccagaggtg
gagcagttagggagggttgtggaactggacagtgacatggtagatatcacccaggagcca
gttttggataccatgttagaagagagcatgcctgaggatcaggaacctgtgtctgcctca
acacatattgcatcttcactgggaattaatccacatgtcttacagatcatgaaagcatca
ttgcttactgatgaagaagatgtagatatggcactggatcaacgcttcagtcgcctgcct
tccaaagcagatacttctcaagaaatctgttctcccagactccccatttcagcatcccac
tcgtcgaaaactcgttcactagttggtgggttactacaatcaaaatttacaagtggagct
tttctttcaccaagtgtctctgtgcaagaatgtcgtactcccagagcagcatctttaatg
aatatcccatccacatcctcttggtctgtccctccacccctgacttctgtgttcacaatg
cccagcccagcccctgaggttccgttgaaaacagtgggtacacgtaggcaactaggccta
gtccctcgtgaaaagtctgtcacctatggcaagggaaaactcttgatggacatggcccta
ttcatgggacgctcatttcgtgttggttggggccccaactggactcttgctaatagtgga
gaacagctgaatggctctcatgaactagaaaatcatcagattgccgattccatggagttt
ggattcctgcccaatccagtagctgttaaacccctaactgagtccccattcaaagttcac
ttagaaaaactcagtttgagacaaagaaagccagatgaagacatgaaattatatcagaca
cctctggagctcaaattaaaacacagcactgtccatgtggatgaactgtgtcctctcatt
gtccccaatctgggagttgctgtcattcatgactatgcagattgggttaaagaagcatca
ggagacttaccagaagcacaaattgtgaagcactggagcctgacatggacactatgtgaa
gccctatggggccacctgaaggagcttgacagccagctaaatgaaccccgtgaatacatt
caaattctggagcgaagaagagctttctcccgctggctatcctgtactgccacacctcag
attgaagaggaagtctccttaacccaaaaaaacagccctgtggaggctgtattcagctac
ctcacaggcaaaaggatcagtgaggcctgctctctggcccagcagtcaggggatcatcgt
cttgctcttcttttatctcagtttgtgggtagccagtcagtccgggagctgctcaccatg
cagttggtggactggcatcagctccaagcagactccttcatccaggatgagagactgcgc
atctttgctctgttggctggaaaaccggtgtggcagctctcagaaaagaagcaaataaac
gtgtgctcccagttggattggaaacgctccctggctatccatctttggtatttgcttcca
ccaacagcctccatttctagggcgctcagcatgtatgaagaagcatttcagaatacctct
gacagtgacagatatgcctgctccccacttccttcgtatctggagggttctggctgtgtg
atagcggaggagcaaaactcacagacaccacttcgagatgtctgctttcaccttctaaaa
ctctacagtgacagacattatgatctcaaccagctgctggagcctcgaagcataacagca
gatcctttggactaccgcctaagctggcacttgtgggaagtgctgagggctcttaactac
acccatctctcagcgcagtgtgaaggtgtgctacaggccagttacgctggccagcttgaa
agtgaggggctctgggagtgggccatctttgtcctcctgcacattgacaactcaggcata
cgtgagaaggctgttcgagagctgcttacccggcactgccagctgttggagacccctgaa
tcttgggctaaagagactttccttacccagaagctccgtgtacctgccaaatggatccac
gaggccaaagctgtgcgagcacacatggaatctgacaagcacttagaggccctttgctta
tttaaggctgagcactggaaccgctgccacaagctcatcatccgacacttagcttctgat
gccatcattaatgagaactatgactacctgaaggggttcttggaagacctggcacctcca
gagcgcagcagcctaattcaggattgggaaacatctgggcttgtttacctggactatatt
agagtcattgaaatgctccgccatatacagcaggtggattgctcaggtaatgacctggag
cagttacacatcaaagtgacttcactgtgcagtcggatagagcagattcagtgttacagt
gctaaagatcgcctggctcagtcagacatggccaaacgtgtagccaacctgctgcgcgtg
gtgctgagtctgcatcatcctcctgatagaacctccgactcaacaccagaccctcagcga
gtccctttgcgcctcttggctccccacattggccggcttcccatgcctgaggactatgcc
atggacgaactgcgcagccttacccagtcctatctgcgagaactggctgttgggagcctg
tga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Disease (1)   
   OMIM (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (38)   
   KEGG ORTHOLOGY (1)   
   RefGene (28)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   HGNC (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (2)   
   OC (1)   
   PHAROS (1)   
   VEGA (1)   
Protein sequence (11)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (9)   
DNA sequence (46)   
   RefSeq(nuc) (12)   
   GenBank (17)   
   EMBL (17)   
Protein domain (4)   
   Pfam (4)   
All databases (107)   

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