KEGG   Homo sapiens (human): 81035
Entry
81035             CDS       T01001                                 
Symbol
COLEC12, CLP1, NSR2, SCARA4, SRCL
Name
(RefSeq) collectin subfamily member 12
  KO
K10062  collectin sub-family member 12
Organism
hsa  Homo sapiens (human)
Pathway
hsa04145  Phagosome
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    81035 (COLEC12)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:hsa04131]
    81035 (COLEC12)
  09183 Protein families: signaling and cellular processes
   04091 Lectins [BR:hsa04091]
    81035 (COLEC12)
Membrane trafficking [BR:hsa04131]
 Endocytosis
  Phagocytosis
   Opsonins
    81035 (COLEC12)
Lectins [BR:hsa04091]
 C-Type lectins
  Group 2: Type II membrane receptors (Asialoglycprotien and DC receptors)
   Scavenger receptor with a CTLD (SRCL)
    81035 (COLEC12)
SSDB
Motif
Pfam: Collagen Lectin_C Filament KxDL Fez1 SepF Alpha-2-MRAP_C MscS_porin
Other DBs
NCBI-GeneID: 81035
NCBI-ProteinID: NP_569057
OMIM: 607621
HGNC: 16016
Ensembl: ENSG00000158270
UniProt: Q5KU26
Structure
Position
18:complement(316737..500701)
AA seq 742 aa
MKDDFAEEEEVQSFGYKRFGIQEGTQCTKCKNNWALKFSIILLYILCALLTITVAILGYK
VVEKMDNVTGGMETSRQTYDDKLTAVESDLKKLGDQTGKKAISTNSELSTFRSDILDLRQ
QLREITEKTSKNKDTLEKLQASGDALVDRQSQLKETLENNSFLITTVNKTLQAYNGYVTN
LQQDTSVLQGNLQNQMYSHNVVIMNLNNLNLTQVQQRNLITNLQRSVDDTSQAIQRIKND
FQNLQQVFLQAKKDTDWLKEKVQSLQTLAANNSALAKANNDTLEDMNSQLNSFTGQMENI
TTISQANEQNLKDLQDLHKDAENRTAIKFNQLEERFQLFETDIVNIISNISYTAHHLRTL
TSNLNEVRTTCTDTLTKHTDDLTSLNNTLANIRLDSVSLRMQQDLMRSRLDTEVANLSVI
MEEMKLVDSKHGQLIKNFTILQGPPGPRGPRGDRGSQGPPGPTGNKGQKGEKGEPGPPGP
AGERGPIGPAGPPGERGGKGSKGSQGPKGSRGSPGKPGPQGSSGDPGPPGPPGKEGLPGP
QGPPGFQGLQGTVGEPGVPGPRGLPGLPGVPGMPGPKGPPGPPGPSGAVVPLALQNEPTP
APEDNGCPPHWKNFTDKCYYFSVEKEIFEDAKLFCEDKSSHLVFINTREEQQWIKKQMVG
RESHWIGLTDSERENEWKWLDGTSPDYKNWKAGQPDNWGHGHGPGEDCAGLIYAGQWNDF
QCEDVNNFICEKDRETVLSSAL
NT seq 2229 nt   +upstreamnt  +downstreamnt
atgaaagacgacttcgcagaggaggaggaggtgcaatccttcggttacaagcggtttggt
attcaggaaggaacacaatgtaccaaatgtaaaaataactgggcactgaagttttctatc
atattattatacattttgtgtgccttgctaacaatcacagtagccattttgggatataaa
gttgtagagaaaatggacaatgtcacaggtggcatggaaacatctcgccaaacctatgat
gacaagctcacagcagtggaaagtgacctgaaaaaattaggtgaccaaactgggaagaaa
gctatcagcaccaactcagaactctccaccttcagatcagacattctagatctccgtcag
caacttcgtgagattacagaaaaaaccagcaagaacaaggatacgctggagaagttacag
gcgagcggggatgctctggtggacaggcagagtcaattgaaagaaactttggagaataac
tctttcctcatcaccactgtaaacaaaaccctccaggcgtataatggctatgtcacgaat
ctgcagcaagataccagcgtgctccagggcaatctgcagaaccaaatgtattctcataat
gtggtcatcatgaacctcaacaacctgaacctgacccaggtgcagcagaggaacctcatc
acgaatctgcagcggtctgtggatgacacaagccaggctatccagcgaatcaagaacgac
tttcaaaatctgcagcaggtttttcttcaagccaagaaggacacggattggctgaaggag
aaagtgcagagcttgcagacgctggctgccaacaactctgcgttggccaaagccaacaac
gacaccctggaggatatgaacagccagctcaactcattcacaggtcagatggagaacatc
accactatctctcaagccaacgagcagaacctgaaagacctgcaggacttacacaaagat
gcagagaatagaacagccatcaagttcaaccaactggaggaacgcttccagctctttgag
acggatattgtgaacatcattagcaatatcagttacacagcccaccacctgcggacgctg
accagcaatctaaatgaagtcaggaccacttgcacagatacccttaccaaacacacagat
gatctgacctccttgaataataccctggccaacatccgtttggattctgtttctctcagg
atgcaacaagatttgatgaggtcgaggttagacactgaagtagccaacttatcagtgatt
atggaagaaatgaagctagtagactccaagcatggtcagctcatcaagaattttacaata
ctacaaggtccaccgggccccaggggtccaagaggtgacagaggatcccagggaccccct
ggcccaactggcaacaagggacagaaaggagagaagggggagcctggaccacctggccct
gcgggtgagagaggcccaattggaccagctggtccccccggagagcgtggcggcaaagga
tctaaaggctcccagggccccaaaggctcccgtggttcccctgggaagcccggccctcag
ggctccagtggggacccaggccccccgggcccaccaggcaaagagggactccccggccct
cagggccctcctggcttccagggacttcagggcaccgttggggagcctggggtgcctgga
cctcggggactgccaggcttgcctggggtaccaggcatgccaggccccaagggccccccc
ggccctcctggcccatcaggagcggtggtgcccctggccctgcagaatgagccaacccca
gcaccggaggacaatggctgcccgcctcactggaagaacttcacagacaaatgctactat
ttttcagttgagaaagaaatttttgaggatgcaaagcttttctgtgaagacaagtcttca
catcttgttttcataaacactagagaggaacagcaatggataaaaaaacagatggtaggg
agagagagccactggatcggcctcacagactcagagcgtgaaaatgaatggaagtggctg
gatgggacatctccagactacaaaaattggaaagctggacagccggataactggggtcat
ggccatgggccaggagaagactgtgctgggttgatttatgctgggcagtggaacgatttc
caatgtgaagacgtcaataacttcatttgcgaaaaagacagggagacagtactgtcatct
gcattataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Disease (1)   
   OMIM (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   HGNC (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (1)   
   OC (1)   
Protein sequence (5)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (3)   
DNA sequence (20)   
   RefSeq(nuc) (4)   
   GenBank (8)   
   EMBL (8)   
3D Structure (1)   
   PDB (1)   
Protein domain (8)   
   Pfam (8)   
All databases (57)   

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