KEGG   Homo sapiens (human): 9033
Entry
9033              CDS       T01001                                 

Gene name
PKD2L1, PCL, PKD2L, PKDL, TRPP3
Definition
(RefSeq) polycystin 2 like 1, transient receptor potential cation channel
  KO
K04990  polycystin 2L1
Organism
hsa  Homo sapiens (human)
Pathway
hsa04742  Taste transduction
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09150 Organismal Systems
  09157 Sensory system
   04742 Taste transduction
    9033 (PKD2L1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:hsa04040]
    9033 (PKD2L1)
Ion channels [BR:hsa04040]
 Voltage-gated cation channels
  Transient receptor potential channel (TRP)
   9033 (PKD2L1)
SSDB
Motif
Pfam: PKD_channel Ion_trans Fer4_24 Baculo_PEP_C
Other DBs
NCBI-GeneID: 9033
NCBI-ProteinID: NP_057196
OMIM: 604532
HGNC: 9011
Ensembl: ENSG00000107593
Vega: OTTHUMG00000018910
Pharos: Q9P0L9(Tchem)
UniProt: Q9P0L9
Structure
PDB: 
3TE3 4GIF 6DU8

Position
10q24.31
AA seq 805 aa
MNAVGSPEGQELQKLGSGAWDNPAYSGPPSPHGTLRVCTISSTGPLQPQPKKPEDEPQET
AYRTQVSSCCLHICQGIRGLWGTTLTENTAENRELYIKTTLRELLVYIVFLVDICLLTYG
MTSSSAYYYTKVMSELFLHTPSDTGVSFQAISSMADFWDFAQGPLLDSLYWTKWYNNQSL
GHGSHSFIYYENMLLGVPRLRQLKVRNDSCVVHEDFREDILSCYDVYSPDKEEQLPFGPF
NGTAWTYHSQDELGGFSHWGRLTSYSGGGYYLDLPGSRQGSAEALRALQEGLWLDRGTRV
VFIDFSVYNANINLFCVLRLVVEFPATGGAIPSWQIRTVKLIRYVSNWDFFIVGCEVIFC
VFIFYYVVEEILELHIHRLRYLSSIWNILDLVVILLSIVAVGFHIFRTLEVNRLMGKLLQ
QPNTYADFEFLAFWQTQYNNMNAVNLFFAWIKIFKYISFNKTMTQLSSTLARCAKDILGF
AVMFFIVFFAYAQLGYLLFGTQVENFSTFIKCIFTQFRIILGDFDYNAIDNANRILGPAY
FVTYVFFVFFVLLNMFLAIINDTYSEVKEELAGQKDELQLSDLLKQGYNKTLLRLRLRKE
RVSDVQKVLQGGEQEIQFEDFTNTLRELGHAEHEITELTATFTKFDRDGNRILDEKEQEK
MRQDLEEERVALNTEIEKLGRSIVSSPQGKSGPEAARAGGWVSGEEFYMLTRRVLQLETV
LEGVVSQIDAVGSKLKMLERKGWLAPSPGVKEQAIWKHPQPAPAVTPDPWGVQGGQESEV
PYKREEEALEERRLSRGEIPTLQRS
NT seq 2418 nt   +upstreamnt  +downstreamnt
atgaatgctgtgggaagtcctgaggggcaggagctgcaaaagctggggagtggagcctgg
gacaaccccgcctacagtggtcccccttccccacacgggacgctgagagtctgcaccatc
tccagcacggggcctctccagccccaacccaagaagcctgaagatgaaccccaggagacg
gcatacaggacccaggtgtccagctgctgcctccatatctgtcaaggcatcagaggactt
tggggaacaaccctgactgagaacacagctgagaaccgggaactttatatcaagaccacc
ctgagggagctgttggtatatattgtgttcctggtggacatctgtctactgacctatgga
atgacaagctccagtgcttattactacaccaaagtgatgtctgagctcttcttacatact
ccatcagacactggagtctcctttcaggccatcagcagcatggcggacttctgggatttt
gcccagggcccactactggacagtttgtattggaccaaatggtacaacaaccagagcctg
ggccatggctcccactccttcatctactatgagaacatgctgctgggggttccgaggctg
cggcagctaaaggtccgcaatgactcctgtgtggtgcatgaagacttccgggaggacatt
ctgagctgctatgatgtctactctccagacaaagaagaacaactcccctttgggcccttc
aatggcacagcgtggacataccactcgcaggatgagttggggggcttctcccactggggc
aggctcacaagctacagcggaggtggctactacctggaccttccaggatcccgacagggt
agtgcagaggctctccgggcccttcaggaggggctgtggctggacaggggcactcgagtg
gtgttcatcgacttctcagtctacaatgccaatatcaatcttttctgtgtcctgaggctg
gtggtggagtttccagctacaggaggtgccatcccatcctggcaaatccgcacagtcaag
ctgatccgctatgtcagcaactgggacttctttatcgttggctgtgaggtcatcttctgc
gtcttcatcttctactatgtggtggaagagatcctggagctccacattcaccggcttcgc
tacctcagcagcatctggaacatactggacctggtggtcatcttgctctccattgtggct
gtgggcttccacatattccgaaccctcgaggtgaatcggctcatggggaagctcctgcag
cagccaaacacgtatgcagactttgagttcctcgccttctggcagacacagtacaacaac
atgaatgctgtcaacctcttcttcgcctggatcaagatattcaagtacatcagcttcaac
aaaaccatgacccagctctcctccacgctggcccgctgtgccaaggacatcctgggcttc
gccgtcatgttcttcattgttttcttcgcctatgcccaactcggctacctgcttttcggg
acccaagtggaaaactttagcactttcatcaagtgcattttcactcagttccggataatc
ctcggggactttgactacaatgctatcgacaatgccaaccgcatcctgggccctgcctac
tttgtcacctatgtcttcttcgtcttcttcgtgctcctgaacatgttcctggccatcatc
aatgacacatattcagaggtcaaggaggagctggctggacagaaggatgagctgcaactt
tctgacctcctgaaacagggctacaacaagaccctactaagactgcgtctgaggaaggag
agggtttcggatgtgcagaaggtcctgcagggtggggagcaggagatccagtttgaggat
ttcaccaacaccttaagggaactgggacacgcagagcatgaaatcactgagctcacggcc
accttcaccaagtttgacagagatgggaatcgtattctggatgagaaggaacaggaaaaa
atgcgacaggacctggaggaagagagggtggccctcaacactgagattgagaaactaggc
cgatctattgtgagcagcccacaaggcaaatcgggtccagaggctgccagagcaggaggc
tgggtttcaggagaagaattctacatgctcacaaggagagttctgcagctggagactgtc
ctggaaggagtagtgtcccagattgatgctgtaggctcaaagctgaaaatgctggagagg
aaggggtggctggctccctccccaggcgtgaaggaacaagctatttggaagcacccgcag
ccagccccagctgtgaccccagacccctggggagtccagggtgggcaggagagtgaggtt
ccctataaaagagaagaggaagccttagaggagaggagactctcccgtggtgagattcca
acgttgcagaggagttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Disease (1)   
   OMIM (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (24)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   HGNC (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (7)   
   OC (1)   
   PHAROS (1)   
   VEGA (1)   
Protein sequence (8)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (6)   
DNA sequence (18)   
   RefSeq(nuc) (6)   
   GenBank (6)   
   EMBL (6)   
Protein domain (4)   
   Pfam (4)   
All databases (59)   

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