KEGG   Hydrogenovibrio thermophilus: EPV75_02145
Entry
EPV75_02145       CDS       T05808                                 
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
  KO
K03701  excinuclease ABC subunit A
Organism
htr  Hydrogenovibrio thermophilus
Pathway
htr03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:htr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    EPV75_02145 (uvrA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:htr03400]
    EPV75_02145 (uvrA)
DNA repair and recombination proteins [BR:htr03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     EPV75_02145 (uvrA)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      EPV75_02145 (uvrA)
SSDB
Motif
Pfam: UvrA_inter UvrA_DNA-bind ABC_tran SMC_N AAA_29 AAA_16 RsgA_GTPase AAA_22 AAA_23 nSTAND3 nSTAND1 DnaJ_CXXCXGXG NACHT BCA_ABC_TP_C T2SSE Viral_helicase1 cobW AAA_21 MeaB
Other DBs
NCBI-ProteinID: QAB14552
UniProt: A0A451G4Y5
Position
complement(460934..463765)
AA seq 943 aa
MLEEIIVRGARTHNLKNIDIALPRDKLIVITGLSGSGKSSLAFDTIYAEGQRRYVESLSA
YARQFLSVMEKPDIDHIEGLSPAISIEQKSTSHNPRSTVGTVTEIYDYLRLLYARAGTPR
CPTHHCDLVAQTVSQMVDHTLELPEGTKCLLVAPVVRGKKGSHQNLLDELQAQGYVRARI
DGKLLELDGGIELDKKFKHDIEVVVDRFKIRSDIKQRLAESFETALHLADGIAQVLPMDE
DDDFQLLFSERFSCPHCGYSVPELEPRIFSFNNPHGACPTCDGLGVKQTFDPARVIMHPD
LSLAGGAIRGWDRRHKYYYDILKAVADHYAFDMETPWTELDKKHQDIVLYGSGKEKLPLP
HGRYSDTRRFEGVIPNMERRYAETDSKAVRDELEKFRVSHLCSSCHGTRLNEAARNVFVA
EKTLPELTEQPIGELHTFFTDLKLDGTKGQIAEKIIKEVHDRLSFLVNVGLNYLTLNRSA
DTLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNDRLLNTLNHLRDLGNTVIVV
EHDEDAIRAADYVLDIGPGAGVHGGRIMAQGSPDEIMATKASLTGQYLTGERAIHIPEQR
LPRTKNKTLKIQGASGNNLKNVDLEIPAGLLTCITGVSGSGKSTLINETLYKITANQLNK
VALEPAAYDKVSGLEHFDKVVNIDQSPIGRTPRSNPATYTGLFTPIRELLAATPESRTRG
YTPGRFSFNVKGGRCEACQGDGVLKVEMHFLPDVYVACDVCHGARYNRETLQVDYKGKNI
HEILEMTVEDARAFFDAIPVIARKLQMLMEVGLGYIKLGQSATTLSGGEAQRVKLAKELS
KRDTGNTLYILDEPTTGLHFHDIELLLKVIQNLRDQGNTIVIIEHNLDVIKTADWIVDLG
PEGGSGGGEIIATGTPEDVAKNKHSYTGHYLKKILDAGRRRSG
NT seq 2832 nt   +upstreamnt  +downstreamnt
atgctagaagagattatcgttcgtggcgcacgcacgcacaatttgaaaaacatcgacatt
gcgcttccccgcgacaagctgattgtcatcaccggcctgtccggttccggaaaatcctct
ctagccttcgacaccatttacgccgaagggcaacgtcgttatgtggaatcgctgtccgcc
tatgcccgtcaatttttgtcggtcatggaaaaacccgacatcgaccacatcgaagggctg
tcgccagcgatttccatcgagcaaaaatccacctcccacaacccccgctccaccgtcggc
accgtcaccgaaatctatgactatctgcgtttgttgtatgcacgggccggcacgccgcgt
tgcccgacacaccattgtgacttggtggcgcaaaccgtcagccagatggtcgaccacacg
ttggaactgccggaaggcacgaagtgtttactggtcgcgccggtagtgcgcggcaagaaa
ggttcccaccaaaacctgctggacgagctgcaagcgcagggctatgtgcgcgcccgcatt
gacggtaaactactggaattggacggcggcatcgagctggataaaaaattcaaacacgac
atcgaagtcgtcgtcgatcgcttcaaaatccgctcggacatcaagcaacgtctggccgaa
tcttttgaaaccgcgctgcacctggccgatggtattgcccaagtactgccgatggatgaa
gacgatgatttccaattgctgttttcagaacgcttttcctgcccgcactgcggctactcg
gtgccggaattggaaccacgcatcttctcattcaacaatccacacggcgcctgcccgacc
tgtgacggtctcggcgttaagcaaaccttcgatccggcacgcgtcattatgcacccggat
ttaagcttggcgggtggcgctatccggggctgggaccgccgccataaatactactatgac
attctcaaagcagtggccgaccactatgcattcgatatggaaacgccttggaccgaactg
gataaaaaacaccaagacatcgtgctttacggctccggcaaagaaaaactgccgttgccg
catggccgctattccgacacccgtcgctttgaaggtgtcattccgaacatggagcgtcgc
tatgccgagaccgacagcaaagcggtgcgtgacgaactggaaaaattccgtgtgtcgcat
ttgtgcagcagttgccacggcacccggcttaacgaggcggcgcggaatgtattcgtcgcc
gaaaaaaccctgccggaattgaccgaacagccgattggcgaactccacacctttttcaca
gacctgaagctggacggcaccaaagggcagattgccgaaaaaatcatcaaagaagtgcat
gaccgcttgtcctttttggtcaacgtcggcctcaactacctgaccctgaaccgaagtgcc
gacaccttatccggcggcgaagcgcaacgtatccgcctggccagtcagatcggcgccgga
ctggttggcgtcatgtacgtgctggacgagccctccatcgggctgcaccagcgcgacaac
gaccgtctgttgaataccctgaaccaccttcgtgacttgggcaataccgtcatcgtggtc
gaacacgacgaagatgccatccgcgccgccgattacgtattggacatcggtccgggcgcc
ggcgtccacggcgggcgcatcatggcgcaaggctcaccggatgaaatcatggccaccaaa
gcgtcgctgaccggtcaatacctgaccggcgaacgcgccattcacattccggagcaacgc
ctgccgcgcaccaagaacaaaaccttgaaaatccaaggtgcctcaggcaacaacctgaaa
aacgtggatttggaaatcccggccggtttgctgacctgcatcaccggtgtatccggttcc
ggcaagtcgacactgattaacgagactctctataagatcacggccaaccaactgaataaa
gtggcattggaaccggccgcttatgacaaggtttccggactggaacattttgacaaggtc
gtcaacatcgaccaaagcccgattgggcggacgcctcgctccaacccggcgacttacacc
ggattgtttacaccgatccgtgaattgttagccgccacgccggaatcgagaacccgtggc
tacacgcccggtcgtttcagcttcaacgtcaagggcggtcgctgtgaagcctgccagggt
gacggcgttttgaaagtggaaatgcactttctgccggatgtgtacgtggcgtgcgacgtc
tgtcacggcgcgcgctataaccgtgaaaccctgcaagtggattacaaaggcaaaaacatt
catgaaattctggaaatgacggtggaagatgcccgggcgtttttcgatgccattccggtg
attgcccgtaaattacaaatgctgatggaagtcgggctcggttacatcaaactcggacag
agcgcgaccactctctccggcggtgaagcccagcgcgtcaaactggcaaaagaactgtca
aaacgcgataccggcaacaccctttacattttggatgaaccgacaaccggcttgcatttc
cacgacattgagctattattgaaagtcattcaaaatctgcgcgaccaaggcaataccatc
gtcattatcgaacacaatctggacgtgatcaaaacagcggattggattgtggacctcgga
cccgaaggcgggtctggaggcggtgagatcatcgccaccgggacaccggaagacgtggcg
aaaaacaaacactcctacaccggccattatttgaaaaaaattcttgacgccggccggcgt
agaagcggctaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (19)   
   Pfam (19)   
All databases (26)   

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