KEGG   Helicobacter typhlonius: BN2458_PEG2016
Entry
BN2458_PEG2016    CDS       T04174                                 
Name
(GenBank) Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase
  KO
K14441  ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
Organism
hty  Helicobacter typhlonius
Brite
KEGG Orthology (KO) [BR:hty00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:hty03009]
    BN2458_PEG2016
Enzymes [BR:hty01000]
 2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.4  Transferring alkylthio groups
    2.8.4.4  [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
     BN2458_PEG2016
Ribosome biogenesis [BR:hty03009]
 Prokaryotic type
  ribosomal protein modification factors
   BN2458_PEG2016
SSDB
Motif
Pfam: UPF0004 Radical_SAM NTPase_1 TRAM_2 CLP1_P DUF6363
Other DBs
NCBI-ProteinID: CUU40899
UniProt: A0A099UF34
Position
I:1818777..1820120
AA seq 447 aa
MRFRERQSLHLISLGCTKNLVDSEVMLGRLQSYTLTQELENADVIIINTCGFIESAKQES
IQTILYALNSRKKGAVLVVSGCLSERYAKELKEEIPEIDIITGVGDYDKIDVMVRELKSM
QSNQVFLANETHERSIIGSNFHAYIKLSEGCNQSCSFCAIPSFKGKLHSRSLESTTKELL
HLYEKGFRDFSFIAQDSSSYMRDLGQKDGLIQLIKRIDSLKLPISCRILYLYPTTTSLEL
IATLGNSASFLPYFDMPIQHISDSMLKIMRRGANRAKHIEILKAMREIEGSFVRTSFVIG
HPGEGEAEFEELCAFVEDFTFDRANLFAYSPQLGTRAYEMSNRVSAKTTNARLNRLNAII
KAQVKHHNKVLVGKECVAICEGKSEISEYFYKARLKLWGKDIDGEILLNDSEICDESGQM
LPLNEGYYRMQITEYKQNFLFGKVLAH
NT seq 1344 nt   +upstreamnt  +downstreamnt
atgcgttttagagaacgacagagcctccacctcatctcacttggctgcacaaagaatctt
gtagattctgaagtaatgcttggacgattacaatcttataccctcacacaagagcttgag
aatgctgatgtgattatcattaatacttgcggttttatagaatctgctaagcaagagagc
attcaaaccatactttatgcgcttaactctcgtaaaaagggtgcggtgcttgtagtgagc
gggtgtttaagtgagcgttatgctaaagagctcaaagaggagattccagagattgatatt
attacgggcgtgggcgattatgacaagattgatgtaatggtgagagagcttaaatccatg
caatccaatcaagtttttttagccaatgaaacccacgagcgcagtattatcggctcaaat
tttcacgcatatattaagctaagcgaagggtgcaatcaaagttgtagcttttgtgcgatt
cctagtttcaaggggaagctccactctcgcagcctagaatccaccacaaaagagctgctt
catctctacgaaaagggctttcgtgattttagctttatcgctcaagattctagctcatat
atgcgtgatttagggcaaaaagatgggcttatacagcttattaaacgcattgactcgctc
aaactccccattagctgtagaatcctctatctctaccctacgacaacaagccttgaactc
attgccacgcttggaaactcggcaagtttcttgccctattttgatatgccaatccaacat
atttcagattctatgttgaaaattatgcggcgtggggcaaatagagccaagcacatagag
attttaaaagcaatgcgcgagattgaaggcagctttgtgcgcacgagctttgtgattgga
catccgggcgagggcgaggcggagtttgaagagttatgcgcatttgtggaagatttcaca
tttgatagggcaaatctttttgcctactcgccgcagcttggcacaagagcgtatgagatg
agtaatcgtgtgagtgccaaaacgactaacgcacgactaaataggctcaatgccattatc
aaagcgcaggtaaaacatcacaataaagtacttgtaggcaaggaatgcgtggcaatttgt
gagggtaaaagcgagataagcgagtatttttataaggcgcgattaaaactttggggtaaa
gacattgatggggagattctgcttaatgatagtgagatttgcgatgaaagtgggcaaatg
cttccgctgaatgagggctattatcgtatgcaaatcacagaatataagcaaaactttctt
tttggtaaagttcttgcgcactaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (9)   
   KEGG COMPOUND (9)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (25)   

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