KEGG   Ictalurus punctatus (channel catfish): 108265750
Entry
108265750         CDS       T04658                                 
Name
(RefSeq) NPC1-like intracellular cholesterol transporter 1
  KO
K14461  Niemann-Pick C1-like protein 1
Organism
ipu  Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:ipu02000]
    108265750
Transporters [BR:ipu02000]
 Solute carrier family (SLC)
  SLC65: NPC-type cholesterol transporter
   108265750
SSDB
Motif
Pfam: Patched NPC1_N Sterol-sensing MMPL Folate_rec
Other DBs
NCBI-GeneID: 108265750
NCBI-ProteinID: XP_017323893
Ensembl: ENSIPUG00000004087
UniProt: A0A2D0QZR1
Position
5:complement(2621612..2640824)
AA seq 1373 aa
MGVLAKKWDDGFIFLTLAAYWVLCDAQPQPGFCVMYDECGLNPNVAGSLIPAKIPCKSYQ
QASSVVGQHYQLLKEICPMLDRGEGETFACCTSTQLHALKNSLSLSKAVLLRCPSCAYNF
AHLHCITTCSPNQSQIINITETVNVTINGVPKDAVVAYQAYVSTRFSDASFRSCQNVRIP
STGGYAIATMCGRYGHKLCTPQRWLDFQGDTSNGLAPLDIDFRLIPPGEMSQVPAGMVPY
AGLAIGCNESSPTGEEECSCQDCLDACPSVPPPQPIPEETSFMVGEMNGILFICLLIFIF
LSLLFFGFLLAKLLFQTRKSKMSTLGKDKNANEVDLNQTVEPKDVTCSDRASLATQEFLG
SHFQIWGTIMARYPKTVIIVCLVAVVAFSTGLMYIELTTDPVQLWSAPDSRAMREKDFHD
QHFAPFFRTNQLILTAPGRKGYVYDSLLFGKANFSGLISKDLIVQLLALQERIQAIEFWS
DDLNKTVSLKDVCYAPLNPENPALSDCAVNSLPQYFQNSIDNLNAKVNMTELGVTKEVDW
RDHFIYCVNSPLSFKDITALGMSCMADYGGPVFPFLAVGGYNNEDYTNAEAFIVTFSLNN
YPREHPKFKVVQEWESRFLDIVQAYQKDPSTNFTFAYMAERSLEDEINRTTIEDIPIFMI
SYAVIFLYIAVALGEYSSFKRILVDSKFLVGLGGILVVGCSVLASMGFYAWIGVQSSLVI
LQVVPFLVLAVGADNIFIFVLEYQRDIRRPGEQREEQIGRVLGNVAPSMLLCSMSESVCF
FFGALSTMPAVKSFALYAALAVLMDFVLQMTAFVALLSLDARRQDANRCEIACCVTVKKP
RPSKPNEGFLLPLMRKYYAPVLLHPISRIVVIILFLFMFCASIFLLFHVKVGLDQELAMP
SDSYMLTYFAYLYKYFEVGVPVYFVTTRGFNFENVTGMNAVCSSVGCDQFSLTQKIQYAT
AFPDRSYIAIPASSWVDDFIDWLNPQTRCCRIYSFGPNAGKFCPASESALMCLTKCMESP
SNGLLRPTVEEFNKYLPIFLTNRPDLQCPKGGLGAYDTAVVRDNVTGEILASRFMAYHTP
LTNSQEFTAALLMAREIAHNITMAMRNVPGTAPDFEVFPYTVTYVYYEQYISIVNEGLVN
LSLCLLPTFVVCCILLGMDLRSGLLNLLTIVMITVDTVGVMTLWGIDYNAVSLINLVTAV
GISVEFVSHLTRSFALSTLRTKVQRAKDATAKMGSAVFAGVAMTNLPGIIVLAFAKAQLI
QIFFFRLNLVITLLGMAHGLIFLPVLLSYFGPSVNKALLLELQNKKDVEMQQRSAAVYAN
GGFEKQENRISSETENSTTPHNSAPVVPEKLEQEITLEPSTEEDTNHIQSNTL
NT seq 4122 nt   +upstreamnt  +downstreamnt
atgggggtcctggcaaagaagtgggacgacggatttatctttctaacactggctgcatat
tgggtgctttgtgatgctcagcctcaacccggtttctgtgtgatgtatgacgaatgtggt
ctaaaccccaacgtagcagggtccctgatccctgcaaaaataccctgcaaaagttatcag
caagcaagttcagtggtaggtcaacactaccagctattgaaggaaatctgtcctatgttg
gacagaggtgagggggaaacatttgcctgctgcaccagtactcaactgcacgccctgaaa
aacagcctgtcgctatccaaagctgtgctacttcgctgcccatcctgtgcttataatttt
gcccacctgcactgcatcaccacctgcagccccaaccaaagccagataatcaacatcacc
gaaaccgtgaacgtcacaattaacggagtgccgaaagatgccgtggttgcataccaggcc
tacgtttccaccaggttctccgatgcatccttcaggtcctgccagaatgtacgtattcca
tcaacaggtggatacgctatcgctaccatgtgtggccgatatggtcataagctgtgcacg
cctcagcgctggttagatttccaaggtgacacaagcaacggtctggctccacttgatatt
gattttagactcataccacctggcgagatgtcacaggtaccagcaggaatggttccatat
gcgggcttggctataggctgtaatgaatcatcacccactggggaagaagagtgctcttgc
caggactgtctagatgcttgcccttcagttcctccacctcaacctatacctgaggagacc
agcttcatggtcggtgaaatgaatggcatcctcttcatatgcctccttatctttatattt
ttgtccctcctgttcttcggtttccttctggctaagttacttttccagacccgcaagagt
aagatgtcaacgttgggcaaggacaaaaatgcaaatgaagtagaccttaaccaaacagtg
gagcccaaagacgtcacatgctccgatcgtgcaagtctggccactcaagaattcctgggt
tcacactttcagatttggggaactataatggctagatacccaaagaccgtgatcattgta
tgtctagtagcagtggttgcattttcaactgggctgatgtacatagaactgaccacagat
cctgttcagctttggtcggctcccgacagccgtgctatgcgtgagaaggacttccatgac
cagcattttgcccccttctttcgtaccaaccaactgattctgacagctccaggcagaaaa
ggctatgtgtatgattccttgctatttggcaaagcaaacttcagtggcctcatctctaaa
gacctcatcgttcaactattggcgcttcaagagagaattcaggcaatcgagttctggtct
gacgatcttaacaaaaccgttagccttaaggacgtgtgctatgctccgctcaatccagaa
aaccccgctctttctgactgtgctgtcaacagccttcctcaatacttccaaaacagcatc
gataatctgaacgcgaaggttaacatgaccgagctaggtgtgactaaagaagttgactgg
agagatcatttcatctactgcgtcaactctccgttgtcttttaaagacatcactgcgctc
ggaatgagctgcatggctgactacggaggacccgtgtttcccttcttggctgtgggagga
tacaataatgaagactacacaaatgctgaagcgttcatcgtcacgttttctctgaataac
tatccacgcgaacacccaaagttcaaagtggtgcaagaatgggaatccagattcctagac
attgtacaggcgtaccagaaagatcccagcacaaactttacgttcgcctacatggctgag
agatctttagaggatgaaatcaacagaactacaatagaggatatccccatctttatgatc
agctacgcagtcatctttttgtacatcgccgtggctctgggggaatactcatccttcaaa
cgcattctggtggactccaagttccttgttggcctggggggtatattggtagtaggctgc
tcggtcctggcctccatgggtttctatgcttggataggagtccagtcttcgctagtcatt
ctgcaggttgttccctttctagtcctggctgttggagctgacaacatcttcatctttgtt
ctggagtatcagagagacatacgccgaccaggagagcagcgggaggagcagattggtcga
gtccttggcaatgtcgctcccagcatgctcctttgcagcatgtcagaatcagtctgcttc
ttttttggtgctttgagtacaatgcctgccgtgaagtcttttgcgctctacgctgcttta
gccgtcctcatggactttgtgctgcagatgactgcgttcgtggcactgctgtctctcgac
gctcgccgacaagatgccaatcgctgtgaaatagcttgctgtgtgactgtaaagaaacca
cgtccttccaaacccaacgagggcttcctcctccctctaatgcggaaatattatgcccca
gtactgctccaccccatctccaggatagtagtgatcattctgttcctcttcatgttctgc
gcctccatcttccttttgttccatgtgaaggtgggcttggatcaggagctggccatgcca
tcagactcctacatgttgacctactttgcatacttgtacaagtactttgaggtgggggtt
cccgtatattttgtcacaacaagaggcttcaacttcgaaaatgtcactggcatgaacgca
gtgtgttccagcgtcggctgtgaccagttctccctcacccagaagatccagtacgccacg
gcgtttcctgacagatcctacatagctatcccagcatcctcctgggtagacgatttcatc
gactggctgaatcctcagactcgatgctgtcggatttactccttcggccccaacgcaggg
aaattctgtcccgctagtgagagtgccctcatgtgtttgacgaagtgtatggagtcccca
tccaatggcctcctgcgtccaaccgtagaggagtttaacaagtatctccccatctttctc
accaaccggccagacttacagtgtcccaaaggtggtttgggggcttacgacacagctgtg
gtccgggacaatgtgacgggagaaatattagcatctcggttcatggcgtatcacactccg
ctcactaactcgcaggagtttacagcggctctactcatggcgagagaaatcgcccacaac
atcaccatggctatgagaaatgtgccaggcacggctcctgacttcgaggtcttcccctat
actgtgacgtacgtgtactacgagcagtacattagcattgtgaacgagggcctggtgaac
ctctcgctctgtttgttacccaccttcgtggtgtgctgtatcctgctcggcatggacctg
cgctcgggtctcctcaacctcctcaccatagtgatgatcaccgtggatacggtgggtgtc
atgacgctgtggggcatcgactacaatgccgtgtcgctaatcaacctcgtcacggccgtg
gggatttccgtggaatttgtgtctcacctaacgcgttctttcgccctgagcactttgcgc
actaaggtgcagagagccaaagatgctactgctaagatgggcagtgcggtgtttgccggc
gtcgctatgaccaacctgcctgggatcatcgtgctggcatttgctaaagctcagctcatt
cagatcttcttcttccggctgaatctggtcatcacgctgctgggaatggcacacggcctc
atcttcctgcctgtgctgctcagctactttggcccatctgtaaacaaggccttgctgctg
gagctgcagaataagaaagacgtggaaatgcagcagcgcagcgcggcagtttacgccaac
ggtggctttgaaaagcaggagaatcgcatcagttcagaaaccgaaaactccacaacgccg
cacaacagtgctccagtagtcccagaaaagttggagcaggagataacgctagaaccgagt
acagaggaggacaccaaccatatccagagtaacacattatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (32)   
   KEGG ORTHOLOGY (1)   
   RefGene (27)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (43)   

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