KEGG   Ictalurus punctatus (channel catfish): 108276146
Entry
108276146         CDS       T04658                                 
Symbol
arhgef25a
Name
(RefSeq) rho guanine nucleotide exchange factor 25 isoform X2
  KO
K20690  Rho guanine nucleotide exchange factor 25
Organism
ipu  Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ipu04131]
    108276146 (arhgef25a)
Membrane trafficking [BR:ipu04131]
 Others
  Rho GTPase associated proteins
   Rho guanine nucleotide exchange factors (GEFs)
    108276146 (arhgef25a)
SSDB
Motif
Pfam: RhoGEF SH3-RhoG_link PH_10 PH PH_19
Other DBs
NCBI-GeneID: 108276146
NCBI-ProteinID: XP_017343066
Ensembl: ENSIPUG00000008445
UniProt: A0A2D0SKQ2
Position
15:20748267..20829067
AA seq 733 aa
MKPLQKNQGRTDHILGAMADMLSSLAMPSQHWNSEGTEELQVDGEQKAAGQSQLDQERLE
WEQASRDSPERGQRDKEDSYSAAGSEGSISTSVASLPPQASGSSAPNSPGSRRSVSTLKK
WLTNPVRKLSVGSVGGIKGERATRKVEGKGPPPPSRSNPELGNSRAPEDRVTIFTNTDKD
LEWRDGLSASEDVSESPQSHRHQCDFLQGSTSMDPTQNPQPSNLQLEGNGSVLMDDTSSQ
SSVTVDSEEERRSALEKSMYVLEELIETEKLYVADLGLIVDGYMATINTKGVPEDMKGKD
KIVFGNIHQIYDWHKDYFMGELEKCVEEPERLAQLFIKHERRLHMYVVYCQNKPKSEHIV
SEYIDTYFEELKQQLGHRLQLNDLLIKPVQRIMKYQLLLKDFLKYYTKAGMDTEDLEKAV
EVMCFVPKRCNDMMNVGRLQGFEGKITAQGKLLQQDTFTVTEQDSSLLSRPKERRVFLFE
QIVIFSEPIDRKKGFSIPGYIFKNSIKMSCLGVEACVDGDPTRFALTSRGADGNTVRFVL
QSSSVDISRSWVSDVNQILETQRNFLNALQSPIEYQRRESKSNSLGRTMRPPVCATSGLR
PHSSASMDRQRAPCLRAYNTSLPSLYLSSPGPGDASAQLELTQRCKLESRLEAETVSPTQ
VQLAFTEEPCFSHAVHSCQTVSNGVYPANTQGSKQAGESGSRAPLWEAGPSAPGPSSSLQ
HSNHLAQLDEDEL
NT seq 2202 nt   +upstreamnt  +downstreamnt
atgaaacctcttcagaagaaccaggggcgtaccgatcatattttaggtgccatggcggac
atgctgagctcactggccatgcccagccaacactggaactcagagggcacggaggagctg
caagtggatggtgaacaaaaggcagcaggccagtctcagttggatcaagaaaggctcgag
tgggagcaggcatctcgggacagccctgagagagggcaaagagacaaagaagattcgtac
tctgcagcgggtagtgagggcagtatctccacgtcggtggcctctttacctccccaggca
tcaggcagctctgccccaaactcgcctggctcacgtcgctctgtcagtacactgaagaag
tggctgaccaacccggtgcgaaagttgagcgtcgggtcagtcggagggatcaagggggag
agagcgacgcgcaaagtggagggcaaaggccctcctccacctagcaggagcaaccctgag
ctgggcaatagcagggcaccggaggaccgtgtcaccatcttcaccaacacagacaaagac
ctggaatggagggatggtctgtctgcctctgaagatgtctcagaaagcccacaatcccac
aggcaccagtgtgattttcttcaggggtccacctcaatggacccaactcagaatccccaa
cccagtaacctgcagctagaaggcaatggctctgtgctgatggatgacacttccagccaa
tcatcagtcactgtggacagtgaagaggaacggaggagtgcattagagaaaagcatgtat
gtcctcgaagagttgattgagactgagaaactgtatgtagctgacctaggactcatagta
gacggctacatggccactataaacactaaaggcgtaccagaagacatgaagggtaaagat
aaaatagtgtttggcaacatacaccagatctacgactggcataaagattatttcatgggt
gagctggagaaatgtgtggaagagcctgagagactggcacagctcttcatcaaacatgaa
aggcgtcttcacatgtatgtggtatactgccagaacaaacccaagtcagagcacatcgtg
tcagaatacatcgacacctattttgaagagcttaaacagcagcttggtcacaggttacag
ttgaacgatctccttatcaaacctgtgcagagaatcatgaaataccagctgctattgaag
gatttcctgaagtattacaccaaggctggaatggacacagaggatttggagaaagcagtg
gaggtgatgtgctttgttcctaagcgctgtaatgacatgatgaacgtaggacggctgcag
ggatttgaggggaaaatcacagcgcaaggaaagctgcttcaacaagacacttttactgtc
acagaacaggacagtagcttactgtccaggcctaaggagaggcgagtcttcttgttcgag
cagatcgtcatttttagtgagccgattgatcggaagaaaggattctcaattcctggatac
atatttaagaacagcatcaagatgagttgcctgggtgtggaggcgtgtgtagacggtgac
ccgacccgctttgcgctgacatcccgtggtgctgacggcaacactgtgcgattcgttctg
caatcttcctcagtggacatcagcaggtcctgggtgagcgacgtgaaccagatcttggag
acacaacgcaatttcctcaacgccctgcagtcacccatcgagtaccagcgaagggagagt
aagagtaacagtctgggtcgcaccatgagacctccagtgtgtgcaacatctgggctgagg
cctcactcttcagcctccatggacagacagagagcaccctgcctgcgtgcctacaacacg
tccctaccctccctctacctatccagcccggggcctggtgatgcatccgcacagctagag
ttaacacagcgatgcaagctggagtcccggctggaggccgaaacagtttccccaacccaa
gttcagctggcgttcactgaggagccctgtttctcgcatgctgtccactcctgccagaca
gtgtccaacggcgtctatcccgccaacacacaaggctcaaagcaggcaggagagagcggt
tccagagcaccactgtgggaggcgggaccgtcagctcctggcccctcctccagcctgcag
cactccaatcacctggcccagctggatgaagatgaactttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (7)   
   UniProt (1)   
   RefSeq(pep) (6)   
DNA sequence (8)   
   RefSeq(nuc) (6)   
   GenBank (1)   
   EMBL (1)   
Protein domain (5)   
   Pfam (5)   
All databases (40)   

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