KEGG T05896: EKL02

Janthinobacterium sp. 17J80-10: EKL02_01000

Entry

EKL02_01000       CDS       T05896

Name

(GenBank) primosomal protein N'

K04066

primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]

Organism

jaj Janthinobacterium sp. 17J80-10

Pathway

jaj03440

Homologous recombination

Brite

KEGG Orthology (KO) [BR:jaj00001]
09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    EKL02_01000
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:jaj03400]
    EKL02_01000
Enzymes [BR:jaj01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     EKL02_01000
DNA repair and recombination proteins [BR:jaj03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     EKL02_01000

SSDB

Motif

Pfam:

PriA_3primeBD DEAD PriA_C ResIII Helicase_C PriA_CRR

Other DBs

NCBI-ProteinID:

QAU32861

UniProt:

A0A410UND1

Position

complement(244324..246474)

AA seq 716 aa
MEHCILKIALDTPLDSCFDYRWQLVTGAGALPQPGHLAIVPFGRREVVGVIVAVSEHSEV
SPEKLKDALAVHVQIPPLSRAWLALCQFAADYYHRPLGEVAVPGLPKNLRAIKTTALDKA
LKKLHTPVTAQVPAKASRAARARAKTADAEVAVVAVAASDMALEEAAVVPEVPAAPCLNP
PQQAAVDAIAGAAGFAPFLLYGVTGSGKTEVYLQAAARILARAQPEEAPSQVLILVPEIN
LTPQWLANVQARFPHLAIAMLHSGLAEGERLAHWLSAHHGRAQIVLGTRLAILASLPHLK
LLVVDEEHDPSYKQQEGLRYSARDLAVWRAHQLGIPVVLGSATPSLESWQHVQSGRYRKL
ELRERAVPDAVLPKVRLIDMERDKPTGGLTATLVKALKLRLERGEQSLLFLNRRGYAPVI
ACEACGWISNCAHCSAYMVLHKLDHRLRCHHCSCEMRIPRNCPTCGDVDLQPLGRGTQRV
EEGLQQMFPTARILRIDADSTRLKGSAQAAFSAVHQGEVDILVGTQMVAKGHDFQNLTLV
GVLNPDTALFSQDYRAAERLFAQLMQVAGRAGRRAQKADGSPSEVWIQTRYPQHPLYGAL
MAHDYERFAQGQLEERGQADLPPFIFQALLRAEARELQLALEFLHASSQLLEYPGITIHD
PIPMSMTRVANVERAQLLVESGSRPALQAFLNDWLPLLREIRPRVKWSLEVDPVDI

NT seq 2151 nt +upstreamnt +downstreamnt
gtggaacactgcatcctcaaaattgcactcgatacaccacttgacagttgtttcgattat
cgttggcaacttgtcacaggggcgggggcgctgccccagccgggacatctggccattgtg
ccgttcggtcgccgcgaagtggtgggggtcatcgtcgcagtgagcgaacacagcgaggtg
tcgccggaaaagctcaaggatgcgctggcagtgcacgtgcagattccgccgttgtcacgg
gcctggctggctttgtgccagttcgctgccgattattaccatcggccgctgggcgaggtg
gcggtgccgggcttgccgaaaaacttgcgcgccataaagaccacggcgctggacaaggcc
ctgaaaaaattgcacacgccggtgacggcgcaggtaccggcaaaggcatccagagcagcc
cgggcgcgcgcaaaaacggccgatgcagaggttgccgttgtggcggttgcggcgagcgac
atggcccttgaggaagcggccgtggtgcccgaagtgcctgccgcaccatgcctgaacccg
ccgcagcaagccgcggtggacgcgattgccggcgccgcaggatttgcgcccttcctgctg
tatggcgtcaccggcagcggcaagaccgaggtgtacctgcaggcggccgcacgcatcctg
gcgcgggcgcagccggaagaggcgccctcgcaagtgctgatcctggtgccggagattaac
ctgacgccgcaatggctggccaacgtgcaggcgcgttttccgcacctggcgattgcgatg
ctgcacagcggcctggccgagggcgagcgcctggcgcactggctgtcggcacaccatggt
cgcgcgcaaatcgtgctgggcacgcgcctggcgatcctggcatcgttgccgcacctcaag
ctgctggtggtcgacgaagagcacgacccgtcctacaagcagcaggaaggcttgcgctat
tcggcgcgcgacctggccgtgtggcgggcgcaccagctcggcattcccgtggtactgggg
tcggccacgccttcgctggaatcctggcaacatgtgcaatcagggcgctaccgcaagctg
gagttgcgcgagcgggccgtgcccgacgccgtgctgccgaaggtgcgcctgatcgacatg
gagcgcgacaagccgacgggcgggctgaccgccaccctggtcaaggcgctgaagctgcgg
ctcgagcgcggcgagcaatcgctgctcttcctgaaccggcgcggctatgcaccggtgatc
gcctgcgaggcgtgcggctggatcagcaattgcgcgcattgcagcgcctacatggtcttg
cacaagctggaccaccgcctgcgctgccaccattgcagctgcgagatgcgcatcccgcgc
aattgcccgacctgcggcgatgtcgacctgcagcctctggggaggggcacgcaacgcgtg
gaagagggtttgcagcagatgttcccgacagcgcgcatcctgcgcatcgatgccgattcg
acgcgcttgaaaggcagcgcccaagcggcgttcagcgcggtgcaccagggcgaggtggat
atcctggtgggcacgcagatggtggccaaggggcacgatttccagaacctgacgctggtg
ggcgtgctcaatccggatacggcgctgttttcgcaggattaccgcgccgcagaacgcctg
tttgcgcaattgatgcaggtggcagggcgcgccgggcggcgcgcgcaaaaggcggatggc
agccccagcgaagtgtggatccagacacgctatccgcagcatcccctgtatggcgcgttg
atggcacatgactacgagcgctttgcccagggccagctggaagagcgtggccaggccgac
ttgccgccatttatcttccaggcgctgttgcgcgcggaagcgcgcgaactgcagctggcg
ctggaattcctgcatgcctcgagccagcttctggaatatccgggcatcaccatccacgac
ccgattccgatgtcgatgacccgggtcgccaatgtcgagcgggcgcaactgctggtggag
tccggttcgcgtccggcattgcaggcattcctgaatgactggctgccgctgctgcgcgag
atcaggccacgcgtcaaatggtcgctcgaagtcgatccggtcgatatctag

All links

Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (15)   

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