KEGG   Jannaschia sp. CCS1: Jann_3257
Entry
Jann_3257         CDS       T00330                                 
Name
(GenBank) Type I secretion outer membrane protein TolC
  KO
K12340  outer membrane protein
Organism
jan  Jannaschia sp. CCS1
Pathway
jan01501  beta-Lactam resistance
jan01503  Cationic antimicrobial peptide (CAMP) resistance
jan02020  Two-component system
jan03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:jan00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    Jann_3257
  09132 Signal transduction
   02020 Two-component system
    Jann_3257
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01501 beta-Lactam resistance
    Jann_3257
   01503 Cationic antimicrobial peptide (CAMP) resistance
    Jann_3257
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:jan02000]
    Jann_3257
   02044 Secretion system [BR:jan02044]
    Jann_3257
   01504 Antimicrobial resistance genes [BR:jan01504]
    Jann_3257
Transporters [BR:jan02000]
 Other transporters
  Pores ion channels [TC:1]
   Jann_3257
Secretion system [BR:jan02044]
 Type I secretion system
  alpha-Hemolysin/cyclolysin transporter
   Jann_3257
  RTX toxin transporter
   Jann_3257
  Multiple protein transporter
   Jann_3257
  RaxAB-RaxC type I secretion system protein
   Jann_3257
Antimicrobial resistance genes [BR:jan01504]
 Gene sets
  Multipdrug resistance modules
   Multidrug resistance, efflux pump AcrEF-TolC [MD:M00696]
    Jann_3257
   Multidrug resistance, efflux pump MdtEF-TolC [MD:M00697]
    Jann_3257
SSDB
Motif
Pfam: OEP
Other DBs
NCBI-ProteinID: ABD56174
UniProt: Q28M88
Position
complement(3307581..3308969)
AA seq 462 aa
MAVGLLKRVRGALMVTTLAAITALPVQADTLRQVMVDAYRHSDLLEQNRYLLRIQDEGVA
QAVAQLRPVFSFVASIERDIINDTSNASASLVAEYLLYDGGARRFALEAAEETVLAARQQ
LVSLEQQVLFDAVTAYMNVWRDIQIVGVRERNVRVITQQLRAARDRFEVGEDTRTDVAQA
EAQLATARSQLAGAQGALDISRELFNLAIGRYPNGLSGPGAVPNVPRTEVAAQNLARQQH
PAIRALQHEVTAAELGIEQARAGLRPQLSLDGRATEVFENTANPFAEGSSATIGLTLTQP
LYRGGQLLSLERQSRAQAAAVRFSLSQQVRINLQGVGNAWALMRIASAQIQAADQRIAAA
ELAFAGVQEEASLGARTTLDVLDAEQDVLDARISRIEAQTDLYTASYQLLSASGLLTVEA
LHLNVPQYDPAAYANMFSGAPSLVNSPRGAQLDSVLERLGRD
NT seq 1389 nt   +upstreamnt  +downstreamnt
atggcagtagggcttctgaaacgtgtacgcggcgcacttatggtgacgacgcttgcggcg
atcacggcgctgcctgtgcaggccgacaccctccggcaggtcatggtggatgcctaccgc
cactccgaccttctggaacagaaccgctatctattgcgcatccaggacgagggcgtggcc
caggccgtcgcacagcttcgtcccgtgttcagcttcgttgcgtcaattgaacgggacatc
atcaacgatacgtcgaatgcgtctgcctctttggtggcggaatatctgctttatgacggc
ggcgcgcgccgcttcgcgctggaggcggcggaagaaaccgtgctggccgcgcgtcagcag
cttgtgtcgctggaacagcaggtgctgttcgatgccgtgaccgcctatatgaacgtgtgg
cgggacatccagattgtgggcgtgcgcgaacgcaacgtgcgcgttatcacgcaacagctt
cgcgcggcccgggaccggtttgaggttggcgaagacacccggaccgatgtggcccaggcc
gaggcgcaattggccaccgcccgctcgcaactggccggtgcgcagggcgcgctcgatatc
agccgggagctgttcaacttggccatcggacgttatcccaacggcctgtccggccccgga
gccgtgcccaatgtgccccggaccgaggttgcggcccaaaacctcgcacgccaacagcat
cccgcgatccgtgccctgcaacacgaagttaccgcggcggaattggggatcgagcaggcc
cgggccggtttgcgcccccagcttagcctggacggtcgcgcgacagaggtgttcgagaac
accgccaacccctttgcggagggcagctctgccaccatcggcctgacgctgacccagccg
ctctatcggggtgggcagcttctgtcgctggagcggcaatcccgcgcccaggccgccgcc
gtgcggttctccctgagccagcaggtgcgcatcaacttgcagggtgtcggcaacgcctgg
gcgctgatgcggatcgcatcggcccagattcaggcggcagatcaacggattgcagcagca
gagctggcctttgccggggtccaggaagaggcgtcgcttggcgcgcgcaccacccttgat
gtgctggatgcggagcaagacgttctggacgcgcggatcagccggattgaggcgcagacg
gatctttacaccgccagctatcaattgctgtcggcctccggattgctgacggtggaggca
cttcacctcaacgtgccgcaatacgatcccgccgcctacgccaacatgttctcgggcgcg
ccgtcgctggtgaacagcccgcgtggcgcgcagcttgattctgtgctggagcgcttgggc
cgcgactaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (7)   
   KEGG PATHWAY (4)   
   KEGG MODULE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (27)   

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