KEGG   Janthinobacterium sp. 1_2014MBL_MicDiv: YQ44_09745
Entry
YQ44_09745        CDS       T04539                                 
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase
  KO
K14441  ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
Organism
jaz  Janthinobacterium sp. 1_2014MBL_MicDiv
Brite
KEGG Orthology (KO) [BR:jaz00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:jaz03009]
    YQ44_09745 (rimO)
Enzymes [BR:jaz01000]
 2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.4  Transferring alkylthio groups
    2.8.4.4  [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
     YQ44_09745 (rimO)
Ribosome biogenesis [BR:jaz03009]
 Prokaryotic type
  ribosomal protein modification factors
   YQ44_09745 (rimO)
SSDB
Motif
Pfam: TRAM_2 Radical_SAM UPF0004 TRAM CLP1_P
Other DBs
NCBI-ProteinID: APA68070
UniProt: A0A1I9XWC8
Position
2211210..2212574
AA seq 454 aa
MLAMPGAAPKVGFVSLGCPKALVDSEQILTQLRAEGYETAKSYAGADLVIVNTCGFIDAA
VQESLDAIGEALAENGKVIVTGCLGAKKDAAGDDIIMKVHPKVLSVTGPHALAEVMDSVH
FHLPKPHAPFLDLVPPQGVKLTPKHYAYLKISEGCNHRCSFCIIPSMRGDLVSRPIGELM
IEAENLFKAGVKELLVISQDTSAYGVDVKFRSGFWNGRPIKTHMTQLTEALGELAKSYGA
WVRLHYVYPYPHVDQIIPMMSGGHILPYLDIPMQHAHPDVLKRMKRPASGEKNLDRIQAW
RAINPDLTIRSTFIAGFPGETEAEFEYLLDFLKEAQIDRLGCFAYSPVEGATANAIANPV
PEELREERRGRVMLLQEEISKKRLQAKVGKTVRVLIDEVTRSGGVGRSSADAPEIDGVVY
VKPPFEPHRKLAVGQFVDVTITSADAHDLWGAAE
NT seq 1365 nt   +upstreamnt  +downstreamnt
atgctggccatgccaggtgcggcaccgaaagtgggctttgtctcgctcggctgcccgaaa
gcgctggtcgattccgaacaaatcctgacccaactgcgcgccgaaggttacgaaacggcg
aaatcctacgctggcgccgatctggtgatcgtcaatacctgcggtttcatcgatgctgcc
gtgcaagagtcgctcgacgccatcggcgaagcgctggccgaaaacggcaaggtcatcgtg
accggctgcctgggcgccaagaaagatgctgccggcgacgacatcatcatgaaggtgcac
ccgaaagtgctgtccgtcacgggcccgcacgcgctggcggaagtgatggattccgtgcat
tttcacttgccgaaaccgcatgcgccattcctcgacctggtgccgccgcaaggcgtcaag
ctgacgccgaagcactatgcctacctgaaaatttccgagggctgcaaccaccgctgcagc
ttctgcatcatcccatcgatgcgcggcgacctggtctcgcgcccgatcggcgaattgatg
atcgaagcggaaaacctgttcaaggccggcgtcaaggaattgctggtcatttcgcaagac
acctcggcgtatggcgtggatgtgaaattccgctccggcttctggaatggccgtcccatc
aagacccacatgacgcagctgacggaagcgctgggcgagctggccaagtcctacggcgcc
tgggtgcgcttgcactatgtgtatccgtacccgcacgtggaccagatcatcccgatgatg
agcggcggccacatcctgccatacctcgacatcccgatgcagcatgcgcatcctgacgtg
ctgaaacgcatgaagcgcccggccagcggcgagaaaaacctggaccgcatccaggcctgg
cgcgccatcaacccggatctcaccatccgctcgaccttcatcgctggtttcccaggcgaa
acggaagcggaattcgagtacttgctcgacttcctcaaggaagcgcagatcgaccgcctg
ggctgcttcgcgtattcgcccgtcgaaggcgcgacggccaacgccatcgccaaccccgtg
ccggaagaattgcgcgaagagcgccgcggccgcgtcatgttgctgcaggaagaaatctcg
aaaaaacgcctgcaagccaaggtcggcaagaccgtgcgcgtgctcatcgatgaagtcacc
cgttcgggcggcgtgggccgttcgtccgccgacgcgccggaaatcgatggcgtcgtctac
gtcaagccgccgttcgagccgcaccgcaagctggcggtgggccagttcgtcgacgtgacc
atcacctcggccgacgcgcacgacctgtggggcgccgccgagtaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (9)   
   KEGG COMPOUND (9)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (24)   

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