KEGG   Jatropha curcas (Barbados nut): 105650645
Entry
105650645         CDS       T03922                                 
Name
(RefSeq) DNA mismatch repair protein MSH2
  KO
K08735  DNA mismatch repair protein MSH2
Organism
jcu  Jatropha curcas (Barbados nut)
Pathway
jcu03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:jcu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    105650645
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:jcu03400]
    105650645
DNA repair and recombination proteins [BR:jcu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     105650645
SSDB
Motif
Pfam: MutS_V MutS_III MutS_IV MutS_II MutS_I
Other DBs
NCBI-GeneID: 105650645
NCBI-ProteinID: XP_012092958
UniProt: A0A067JKS3
Position
Unknown
AA seq 936 aa
MDEENKLPELKLDAKQAQGFLSFFKTLPDDPRAVRVFDRREYYTSHGENATFIAKTYYHT
TTALRQLGSGPNALSSVSISKNMFETIARDLLLERTDHTLELYEGSGSNWRLVKSGTPGN
LGSFEEVLFANNEMQDTPVVVALIPNFRDNGCTIGLSYVDLTKRILGLAEFLDDSHFTNV
ESALVALGCKECLLPIESGKSTECRPLHDALARCGVMLTERKKNEFKTRDLVQDLSRLVK
GSIEPVRDWVSGFEFAAGALGALLSYAELLADESNYGNYTIRKYNLDSYMRLDSAAMRAL
NVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINCRLDLVQAFVEDT
ALRQDLRQHLKRISDIERLVHNLEKKRAGLHHIVKLYQSSIRLPYIRSALERHDGQFSSL
IKKRYLDPLESLTDNDHLNKFIALVETSVDLDQLENGEYMISPSYDPALSALKDEQESLE
RQIHNLHKQTACDLDLPQDKGLKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKD
GVKFTNTKLKKLGDQYQKLVEEYKNCQKELVGRVIQTAASFSEVFESLAGLLAELDVLLS
FADLASSCPTPYTRPDITPSDVGDIILEGSRHPCVEAQDWVNFIPNDCKLVRGKSWFQII
TGPNMGGKSTFIRQVGVNILMAQVGSFVPCDKASISLRDCIFARVGAGDCQLRGVSTFMQ
EMLETASILKGATDKSLIIIDELGRGTSTYDGFGLAWAICEHLVEVIKAPTLFATHFHEL
TALADEKVETHMKQIIGVANYHVSAHIDSVNRKLTMLYKVEPGACDQSFGIHVAEFANFP
ESVVALAREKAAELEDFSANSIVSNVTTEEVGSKRKREFDPDDMSIGAARAHQFLKEFSD
LPLETMDLKEALQQVSKLKDELKKDAANCHWLQQFL
NT seq 2811 nt   +upstreamnt  +downstreamnt
atggatgaagagaacaagctgcctgaactcaagctagatgcaaagcaggctcaagggttt
ctctctttctttaaaaccctacctgatgaccccagggcagttcgagtgtttgataggcgg
gaatattacacttctcatggtgaaaatgcaaccttcattgcaaaaacatattaccacacc
actactgccttgcggcaattgggtagtggacctaatgccctttccagtgtcagcattagt
aagaacatgtttgaaactattgcccgagatcttctgttagagagaacagaccatacgctt
gaactctatgagggtagtggatccaattggagattggtgaaaagtgggacccctggaaat
cttggaagttttgaagaggttctgtttgctaacaatgaaatgcaggatacccctgtggtt
gttgcactcattccaaacttccgtgataatggctgcactattgggctaagttatgttgat
ttaacaaaaagaattcttggattggctgaatttcttgatgatagtcactttacaaatgtt
gagtcagctttggttgctctcggttgcaaggaatgccttttgcctattgagagcggtaaa
tccactgaatgtagacctttgcatgatgctctggctagatgtggtgtgatgttaaccgag
agaaagaagaacgagttcaaaacaagggatttggtgcaggacctcagtaggcttgtcaaa
ggttccattgaaccagttagagattgggtttctggttttgaattcgcagctggtgctttg
ggggctttactgtcttatgcagaattacttgcagatgagagcaattatgggaattacaca
atcagaaagtataatcttgatagctacatgagactggattctgctgccatgagggctctt
aatgttcttgagagcaaaactgatgcaaacaaaaattttagtttatttggtcttatgaat
agaacctgtacagctggaatgggaaaaagattgcttcatatgtggctaaaacaaccctta
ttagatgttaatgaaatcaactgtagactggacttggtacaagcttttgtagaggacact
gcactacgccaagatctgaggcagcacctaaaaagaatctcagatattgagcgactagtg
cacaatcttgagaagaaaagggctggtttgcatcatattgtgaaactttatcagtcaagt
ataagacttccatacattagaagtgctctagagcggcatgatggacaattttcatccttg
atcaaaaagagatacttggaccctctcgagtcattgactgacaatgatcacttgaataag
ttcattgctctcgtagaaacttctgttgaccttgatcaacttgagaatggggagtacatg
atttcgccaagctatgaccctgcactgtctgcacttaaagatgagcaggagtcattggag
cgccaaatacacaatttgcataagcaaactgcttgtgatcttgatcttcctcaagataaa
ggattaaagttagataaaggaacacaatttggacatgtcttcagaattacaaagaaagaa
gagccaaaaataaggaaaaagctgacaacccaatttattgtccttgaaacccgaaaagat
ggagtgaaatttactaatacaaaacttaagaaattgggggatcagtaccaaaagttagta
gaggagtacaagaactgtcaaaaagagctggtcggtcgagtaattcaaactgcagcaagt
ttctctgaggtgtttgagtctttagctggtttgctcgcagagttggatgtcttactcagt
tttgctgatttggcttctagctgtccaactccctacacgagaccagacatcactccatca
gatgtgggagatattatattagaagggagtagacatccttgtgtggaagctcaagactgg
gtgaattttattccaaatgattgtaaacttgtcaggggaaagagttggttccaaataatt
acagggcctaacatgggtggaaagtcgacatttattcggcaagtaggtgtaaatattctt
atggcacaagttggttcctttgttccttgtgacaaggctagcatttcacttcgcgattgc
atttttgctcgtgtgggtgctggcgactgccaattacgtggagtttctacctttatgcaa
gaaatgcttgaaactgcttcaatactcaaaggagctacagataagtcattgataatcatt
gatgagttgggtcgtggcacttcaacatatgatggatttggtttggcctgggccatatgc
gaacaccttgttgaagtgattaaagcacctaccttatttgcaacacactttcatgaacta
actgcactggctgatgaaaaagttgagacccatatgaagcaaattattggcgtggcaaac
tatcatgtcagtgcacacattgactcggtgaatcgcaagttgaccatgttatacaaggtc
gaaccaggtgcttgtgatcaaagttttggtattcatgttgcagaatttgcaaactttcct
gaaagtgttgttgcccttgctcgagaaaaggcagctgagttggaagatttctcagctaat
tctattgtttcaaatgttactacagaagaggtgggatccaaacgtaagagagagtttgat
cctgatgatatgtctataggtgccgctcgggctcaccagtttctgaaagagttctctgat
ttgccgttggagactatggatttgaaggaggctctgcaacaagtaagcaagcttaaggat
gaattaaagaaggatgcagcaaattgccactggctccagcaatttttatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (5)   
   Pfam (5)   
All databases (18)   

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