KEGG   Janthinobacterium lividum: G3257_21430
Entry
G3257_21430       CDS       T06723                                 
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
  KO
K00962  polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
Organism
jlv  Janthinobacterium lividum
Pathway
jlv03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:jlv00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    G3257_21430 (pnp)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:jlv03019]
    G3257_21430 (pnp)
   03016 Transfer RNA biogenesis [BR:jlv03016]
    G3257_21430 (pnp)
Enzymes [BR:jlv01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.8  polyribonucleotide nucleotidyltransferase
     G3257_21430 (pnp)
Messenger RNA biogenesis [BR:jlv03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     G3257_21430 (pnp)
Transfer RNA biogenesis [BR:jlv03016]
 Prokaryotic type
  tRNA degradation factors
   G3257_21430 (pnp)
SSDB
Motif
Pfam: RNase_PH RNase_PH_C PNPase S1 KH_1 KH_2 DUF5813 KhpA-B_KH PCB_OB
Other DBs
NCBI-ProteinID: QKY04556
UniProt: A0A0A6DYZ8
Position
complement(4808791..4810908)
AA seq 705 aa
MFNKVTKTFQYGQHQVTLETGEIARQASGAVLVSIEDTVVLATVVARKDAKPGQDFFPLT
VDYVEKTYAAGKIPGGFFKREGRPSEKETLTSRLIDRPIRPLFPEGYLNEVQVIIHVLSV
NPEIDPDIAAMIGASAALCVSGVPFNGPIGAARVGYANGQYILNPTVQQLKTSEMDLVVA
GTETAVLMVESEAKQLSEEIMLGAVVFGHDQMKVVIDAIHDLVRDGGKPEVEWAPAPKNE
ALIARVAHFANAKINDAYQTKDKQERTAKLKAATSEVIADLSAEAAAAGGASIDSAEVNN
ILFDIEAKIVRTQILDGEPRIDGRDTRTVRPISIRTSVLPRTHGSALFTRGETQALVVAT
LGTARDSQKIDALMGEFTDSFMLHYNMPPFATGETGRVGTPKRREIGHGRLAKRALIAAL
PAAEEFSYSVRLVSEITESNGSSSMASVCGGCLALMDAGVPMKEHVAGIAMGLIKEGGKF
AVLSDILGDEDHLGDMDFKVAGTRNGITALQMDIKIMGITKEIMQVALAQAKEGREHILG
EMQKAMPHVKTELSDFAPRLITIKINPEKIRDVIGKGGAVIRALTEETGTQIDISDEGVV
TIASVDAAAGQEAKRRIEELTASVEVGKTYEGTVLKLLDFGAIVQVMPGKDGLLHISQIA
NERVNAVADYLKEGQLVRVKVLETDDRGRLKLSMKAAEGNEAPAA
NT seq 2118 nt   +upstreamnt  +downstreamnt
atgtttaacaaagttacgaaaaccttccagtacggtcaacaccaagtgaccctggaaacc
ggcgaaatcgcacgtcaggcatccggcgcagtgctggtgtcgatcgaagataccgtcgtt
ctggcaacggtagtggcacgcaaagatgccaagccaggccaggatttcttccctttgacg
gttgattatgtcgagaaaacctatgctgccggtaaaattccgggcggttttttcaagcgc
gaaggccgtccttccgaaaaagaaacactgacatcccgtttgatcgaccgtcctatccgt
ccgctgttcccggaaggctacctgaatgaagtgcaagtcatcattcacgtgttgtcggtc
aaccctgaaatcgatccggacatcgccgccatgatcggcgcatcggccgccctgtgcgta
tcgggcgtgcctttcaacggtcctatcggcgccgcgcgcgtcggttacgccaatggccag
tacatcctgaacccgaccgtccagcagctgaaaacgtcggaaatggacctggttgtcgcc
ggtaccgaaacggctgtgctgatggtcgaatcggaagcgaaacagctgtccgaagaaatc
atgctgggcgccgtggtcttcggccacgaccagatgaaagtcgtcatcgacgcgattcac
gacctggtgcgtgacggcggcaagccggaagtggaatgggcgcctgcgccgaaaaacgaa
gcactgatcgcccgcgtcgcgcattttgccaacgccaagatcaatgacgcgtatcaaacc
aaggacaagcaagagcgtacggccaagctgaaagcagcgacgtcggaagtgatcgccgac
ctgtcggccgaagcggctgccgccggcggcgcatcgatcgacagcgctgaagtcaacaac
atcctgttcgacatcgaagcgaaaatcgtgcgtacgcaaatcttggacggcgagccacgc
atcgacggccgcgacacgcgcaccgtgcgtccgatctcgattcgcaccagcgtgctgcca
cgcacccacggttcggccctgttcacgcgcggcgaaacgcaagcgctggtcgtggcgacg
ttgggcaccgcccgcgacagccagaagatcgatgcgctgatgggcgagttcaccgattcg
ttcatgctgcattacaacatgcctccgttcgccaccggcgaaacgggccgcgtcggtacg
ccaaaacgtcgcgaaatcggccacggccgcctggccaagcgcgcgctgatcgccgccttg
ccagcagctgaagagttcagctactcggtgcgcctggtgtcggaaatcacggaatcgaac
ggttcctcgtcgatggcatcggtgtgcggcggctgcctggcactgatggacgccggcgtg
ccgatgaaggaacacgtggccggtatcgccatgggcctgatcaaggaaggcggcaagttt
gccgtgctgtccgacatcctgggcgacgaagatcacctgggcgacatggacttcaaggta
gccggtacccgcaacggtatcacggcgctgcagatggacatcaagatcatgggcatcacc
aaggaaatcatgcaagtggcactggcgcaagccaaggaaggccgcgagcacatcctgggc
gaaatgcaaaaagccatgccgcacgtcaaaaccgaactgtccgatttcgcaccgcgtctg
atcaccatcaagatcaacccggaaaaaatccgtgacgtgatcggcaagggcggcgccgtg
atccgcgcgctgaccgaagagacgggcacccagatcgacatcagcgacgaaggcgtggtc
accatcgcttccgtcgacgctgctgccggccaggaagccaagcgccgcatcgaagaactg
accgcttccgtcgaagtgggcaagacctacgaaggcaccgtgctgaaactgctggacttc
ggcgccatcgtgcaagtcatgccaggcaaggacggcttgctgcacatctcgcagatcgcc
aacgagcgcgtcaacgccgtggccgactacctgaaagaaggccagctggtgcgtgtaaaa
gttctggaaacggacgaccgcggccgcctgaagctgtcgatgaaagctgccgaaggcaac
gaagcgccagccgcttaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (19)   

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