KEGG   Juglans regia (English walnut): 109007303
Entry
109007303         CDS       T05245                                 
Name
(RefSeq) nuclear pore complex protein NUP62
  KO
K14306  nuclear pore complex protein Nup62
Organism
jre  Juglans regia (English walnut)
Pathway
jre03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:jre00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    109007303
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:jre03019]
    109007303
Messenger RNA biogenesis [BR:jre03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     109007303
SSDB
Motif
Pfam: Nsp1_C Nucleoporin_FG ATG17_like COG3_N FapA
Other DBs
NCBI-GeneID: 109007303
NCBI-ProteinID: XP_018842461
UniProt: A0A2I4GEZ1
Position
16:4526784..4537880
AA seq 752 aa
MSGFSFGSSSSSSSSQAAPFSFGTSSTVFGSSSAPSFGSTGGGGGGVFSFPSTSASSAFS
TSNPSSAPPALFGFGSSISSSSTSSPAPSLSLSFNSALAASSSAASSFGTLTSSSTATPS
SSMFGTISSAASSASPLFGSATLGSPFGTASSAGTSGSSATGSGSSLFGASLSASTIGSS
LFGTAASAPKSSSSSIPFGTSASATPTSASPLFGATPSAGATSASGSTLFGTTVPSASPG
LSPFGSSISAPSSTPSIFGTTAFSSSSSSSAAASPFLTSALFASSSSSSSAPTTPAFSFA
SSSGSNSTTASPFSSSSGFSLSTASAFSKPIPAPTPPATLPSSSTTTSSAFSFVPASSSA
SQSSFLFGTAAASSAAAVSTTPTAKPTSLSLGTSPSPLFSTVTTTSASTPAATSSSTTTT
QSSFSVPGFGVSSSSTAGSASTTALASSAASSSGVGSFTGFGVTSATAASSGLPGFSFSK
QSTPASSSQAHSTTVVPPFGVSSTSAADTTSSASTTVTQTSSLIVASSSSGTTTSVSTIV
STAPKLPSEITGKTVEEIIKEWNAELQERTGKFRKQANAIAEWDRRILHNRDVLLRLEIE
VAKVVETQDNLERQLELVETHQQEVDKALQSMEEEAERIYKDERALLHDDEAASTRDAMY
EQSEFIERELEQMTEQIKSIIQTLNANQGGELDAVDGMTPLDVVVRILNNQLSSLMWVDE
KAEEFSSRIQKLASQGSAADHRELMDPKFWKT
NT seq 2259 nt   +upstreamnt  +downstreamnt
atgtcgggcttctcattcggttcttcatcctcctcttcttcctcacaagccgcgccattc
tctttcggaacctcttctaccgttttcggttcgtcttccgctccatcattcggatccacc
ggcggtggcggtggcggcgtcttctctttcccctccacctccgcttcttccgcgttctct
acctcaaaccctagctccgctccgcccgccttattcggcttcggatcctccatttcatct
tcttctacctcttccccagctccatccttgtcgttatcctttaattccgccctggccgct
tcgagttccgccgcctcctcgtttggcacgctaacttcttcgtccactgcaaccccttct
tcatccatgtttggaacaatctcctctgcggcgagctcagcctctcccttgtttggttcg
gctactttgggctcgccctttgggaccgcttcatctgctggtacttccggctcatccgcg
acgggctccggttcatccttattcggggcatctctgtcggcttcaactattggttcttcc
ttatttggaacagctgcgtcggctcccaagtccagttccagttctatcccgttcggaacg
tcggcgtccgcaacgcccacttctgcttcacctctgttcggagcgacgccgtctgcggga
gcgacctccgcttctggttcaacacttttcggaacaacagttccatcagcgagtccaggt
ttatcccccttcggatcatctatatccgcaccgagttccaccccatccatattcggaaca
acagcattctcatcatcatcatcatcatctgctgccgcttctccatttttaacctccgcc
ttgtttgcttcttcttcgtcttcgtcttcggctccaacgactcctgcattctcatttgct
tcgagctcaggttcaaattcaactacagcttcgcctttctcgtcttcttcgggattttca
ttatcaactgcttcagctttttcaaaacctattccagctcctaccccccccgctacttta
ccttcctcttcaacaacgacatcttctgccttctcattcgtcccggcctcttcttcagct
tctcagtcttcttttcttttcggcactgctgctgcctcatcggccgccgcagtttctacc
acacctacagcaaagcctacttctctatctctcggaacatctccatcgccgttgttttcg
accgtcactaccacaagtgcttcgactccggccgctactagcagtagtactactactaca
caaagttccttctctgtgcctggttttggagtaagttcttcttcgactgcgggcagtgct
tcaacaacagctcttgccagctctgctgcttcttccagcggtgtgggatctttcacaggt
tttggcgttacgagcgcaactgctgcttcatcggggcttcctggtttttcgtttagtaaa
caatcaacgcctgcttcgtcctcacaagcacattcgacaactgtcgtgcctccttttggt
gtctcttcaacttctgcagctgacacaacttccagtgccagtactactgtaactcagacg
tcatctcttattgtggcctcctcgagtagtggaacaactacaagtgtcagcactatagta
tctacggctccaaaattaccgtcagagatcactgggaagaccgttgaagagatcatcaag
gagtggaatgctgaactgcaagaacgtactggaaagttccgaaagcaggctaatgcgata
gctgagtgggacaggagaattttgcacaatcgtgatgtcctccttaggctcgagattgaa
gtggcaaaagtggttgagacccaagataacttggagcggcaactggagttagttgagact
catcaacaagaggttgacaaggctttgcaaagtatggaagaagaagctgagcgaatttac
aaggatgagcgtgcgttgcttcatgatgatgaagcagcttccacaagagatgcaatgtat
gagcagtctgaatttatagagagggaattagaacagatgacagagcagatcaaatcaatt
attcagaccctaaatgccaaccagggaggagaacttgatgcggttgatgggatgacccca
ctagatgttgtagtccgaattttaaacaatcaactcagttctttaatgtgggttgatgag
aaggctgaagaattttcttcacgcattcagaaacttgccagccaaggttctgccgcagat
catcgtgaattgatggatccaaagttctggaaaacatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (173)   
   KEGG ORTHOLOGY (1)   
   RefGene (169)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (185)   

Download RDF
DBGET integrated database retrieval system