KEGG   Juglans regia (English walnut): 109011920
Entry
109011920         CDS       T05245                                 
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 37-like
  KO
K11594  ATP-dependent RNA helicase DDX3X [EC:5.6.2.7]
Organism
jre  Juglans regia (English walnut)
Brite
KEGG Orthology (KO) [BR:jre00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:jre03019]
    109011920
   03041 Spliceosome [BR:jre03041]
    109011920
   03036 Chromosome and associated proteins [BR:jre03036]
    109011920
Enzymes [BR:jre01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     109011920
Messenger RNA biogenesis [BR:jre03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     109011920
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     109011920
Spliceosome [BR:jre03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA helicase-like proteins
    109011920
Chromosome and associated proteins [BR:jre03036]
 Eukaryotic type
  Gene silencing
   RISC (RNA-induced silencing complex)
    109011920
SSDB
Motif
Pfam: DEAD Helicase_C ResIII
Other DBs
NCBI-GeneID: 109011920
NCBI-ProteinID: XP_018848856
UniProt: A0A2I4GY71
Position
3:2376162..2381455
AA seq 619 aa
MTTSWADSVANTASENVATGSSNSNGLKRPTRSTYVPPHLRNRQPPSSDPPAQLQTSSPA
NDRVNYGGITTKSHWGGGSRPDFGRTGHNGSIGGRGGSGWNSRSGGWERGREREVNPFGD
DENLMQEFSEEENTGINFEAYDDIPVETSGNNVPPPVNTFAEIDLGDALNQNIWRCKYVK
PTPVQRYAIPISLAGRDLMACAQTGSGKTAAFCFPIISGIMRGQYVQRPRGARIVYPLAL
ILSPTRELSCQIHNEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDL
LERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPPPGARQTMLFSATFPKEIQ
RLASDFLSNYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLIHAQKENGVQGKQALT
LVFVETKKGADSLEHWLCLNGFPATTIHGDRTQQERELALRLFKSGKTPILVATDVAARG
LDIPHVGHVVNFDLPNDIDDYVHRIGRTGRAGKTGLATAFFNDNNSSMARPLADLMQEAN
QEVPAWLTRYASRASYGGGGGRNRRTGGGRFGGRDFRRDGSFNRATDYYGGANSSGGYGF
SGGYGGGGGYGAGVTSAWD
NT seq 1860 nt   +upstreamnt  +downstreamnt
atgacaacttcatgggcagattctgtggctaacactgcgtctgagaatgtggcaactggt
tcttctaatagcaatggcttaaaacgccctacccgatcaacctatgttccgcctcatctt
cgtaataggcaacctccttcatcagacccccctgctcaattacaaacttcttcaccagcc
aatgatcgggttaactacggtggaatcacaaccaagtcacactggggtggaggttctagg
cccgacttcgggcgtacaggacataatggttctattggtggccgagggggtagtggatgg
aatagtagaagtggggggtgggaacgagggagagaacgtgaggtgaacccttttggtgat
gatgaaaatttaatgcaagaatttagtgaggaagaaaatacgggtattaactttgaggct
tatgatgacattcctgtggagacgagtgggaacaatgtgcccccacctgtgaatactttt
gcagagattgacttgggggacgcattgaatcaaaatatttggaggtgcaagtatgtgaaa
ccaactcccgtacagcgttatgctataccaatttctcttgcggggcgggatctaatggct
tgtgctcagactggatcagggaagactgctgccttttgctttccgattatcagtggaatc
atgcggggccagtatgttcagagacctcgtggagcacggattgtgtaccctcttgctcta
attctttcacctacaagggagttatcatgccagatacacaatgaagcaaaaaagttttcc
tatcaaactggtgtcaaggtggtcgttgcctatggaggagcaccaatcaatcaacagttg
cgagagcttgagagaggagttgatatccttgtggcaactccaggccgattggttgatttg
cttgagagggctagagtctcgttgcagatgatcagatatttggctcttgatgaggcagat
cggatgctggatatgggttttgagccccaaatccgaaagatagtggagcaaatggacatg
cctccaccaggtgcgagacagacgatgctgtttagtgccacctttcctaaagagatacag
aggttggcatctgattttctttcaaattacatatttttggctgttggaagggttggttca
agtactgatttgattgtccaaagagttgaatttgttcacgagtctgataagagaagccat
cttatggatcttattcatgctcagaaggaaaatggagttcagggcaagcaagccttaaca
ttagtttttgtggagacaaagaagggagctgattcattggagcattggttgtgccttaat
ggatttcctgcaactaccattcatggtgatagaacacaacaggagagagaactagcatta
agattgttcaaaagcggaaagacaccaattttagtggcaacagatgtggcagcacgtggt
cttgacattcctcacgtagggcatgtggtcaactttgatcttccaaatgacattgatgat
tacgttcaccggataggacgtacagggcgagctggaaaaacaggattggcaacggctttc
tttaacgacaataattcatcgatggcaaggccactagctgatctaatgcaagaagcaaat
caagaagtacctgcttggcttacacgttatgcatcaagggcttcttatggtgggggtggt
ggcagaaatcggcggactgggggaggccgttttggtggccgtgattttaggagggatggt
tcatttaatagggccacagattactatggtggagcaaatagtagcggtggctatgggttt
tctggtggttatggcgggggtggggggtatggtgcaggcgtgaccagtgcttgggattag

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Ontology (5)   
   KEGG BRITE (5)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (27)   
   KEGG ORTHOLOGY (1)   
   RefGene (23)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (40)   

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