KEGG   Kocuria flava: AS188_08410
Entry
AS188_08410       CDS       T04206                                 
Name
(GenBank) polyribonucleotide nucleotidyltransferase
  KO
K00962  polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
Organism
kfv  Kocuria flava
Pathway
kfv03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:kfv00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    AS188_08410
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:kfv03019]
    AS188_08410
   03016 Transfer RNA biogenesis [BR:kfv03016]
    AS188_08410
Enzymes [BR:kfv01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.8  polyribonucleotide nucleotidyltransferase
     AS188_08410
Messenger RNA biogenesis [BR:kfv03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     AS188_08410
Transfer RNA biogenesis [BR:kfv03016]
 Prokaryotic type
  tRNA degradation factors
   AS188_08410
SSDB
Motif
Pfam: RNase_PH PNPase S1 KH_1 RNase_PH_C KH_2 PCB_OB VCPO_N KhpA-B_KH aRib
Other DBs
NCBI-ProteinID: ALU39768
UniProt: A0A0U3HG14
Position
1883997..1886261
AA seq 754 aa
MEGPEIQYAEAVIDNGSYGKRTVRFETGRLAKQAAGAALVTIDEDTTLLSATTVGKSPRE
GFDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPAFGKGIRNEVQ
VVVTVLSINPDEIYNTVAINAASMSTSLSGMPFQGPIGGVRMALMAGPGGTHQWVAFPKH
SQLENAVFDMAVAGRVVTGADGTEDVAIMMVEAEATDNSWELIKADGAVAPTEELVAEGL
EAAKPFIKALCDAQADLKARAARPALELPRFGGFGDDVRDAVAQAAGTRLAEVYSIAGKQ
EREAATDELHHAVLAELTGEGRPFADRKDEVNGAYQALTKHTVRQRILTEQVRIDGRGLT
DIRQLTAEVEVLPRVHGSAIFERGETQIMGVTTLNMLKMEQQIDSLSPVKTKRYVHHYNF
PPYSTGETGRVGSPKRREIGHGALAERAITPVLPSREEFPYAIRQVSEALGSNGSTSMGS
VCASTLSLLNAGVPLRAPVAGIAMGLVSDEVDGETRYAALTDILGAEDALGDMDFKVAGT
AEFVTAIQLDTKLDGIPSSVLDAALTQAREARLHILEVMTGAISEPDEMSEFAPRVISVT
VPVSKIGEVIGPKGKMINQIQEDTGTDISIEDDGTVYIGATDGPSAEAARAAINAIANPQ
VPEVGERYLGTVVKTTAFGAFVSLTPGKDGLLHISELRKLNEGKRVTDVEDVLGVGQKVQ
VEITKVDDRGKLSLAPVVAEEPGEAAEAEPADQD
NT seq 2265 nt   +upstreamnt  +downstreamnt
gtggagggtcccgagatccagtacgccgaggccgtcatcgacaacggctcctacgggaag
cgcaccgtgcgcttcgagaccggccggctcgccaagcaggccgccggcgccgccctcgtc
accatcgacgaggacaccaccctgctctccgccaccacggtgggcaagtccccgcgcgag
ggcttcgacttcttccccctgacggtggacgtcgaggagcgcatgtacgccgccgggcgc
atccccggctccttcttccgccgcgagggccgcccctccacggacgcgatcctcacctgc
cggctgatcgaccgcccgctgcgccccgccttcggcaagggcatccgcaacgaggtccag
gtcgtcgtcacggtcctgtccatcaacccggacgagatctacaacaccgtggcgatcaac
gccgcctcgatgtccacctcgctgtccgggatgcccttccagggccccatcggcggcgtg
cgcatggccctgatggccggcccgggcgggacccaccagtgggtggccttcccgaagcac
tcccagctcgagaacgccgtgttcgacatggccgtggccgggcgcgtggtgaccggcgcc
gacggcaccgaggacgtcgcgatcatgatggtcgaggccgaggccaccgacaactcctgg
gagctgatcaaggccgacggcgccgtggcccccaccgaggagctcgtggccgagggcctc
gaggccgccaagcccttcatcaaggccctgtgcgacgcccaggccgacctcaaggcgcgg
gccgcccggcccgccctcgagctgccccgcttcggcggcttcggcgacgacgtccgcgac
gccgtggcgcaggccgccggcacccggctggcggaggtctactcgatcgccggcaagcag
gagcgcgaggccgccaccgacgagctgcaccacgccgtgctcgccgagctcaccggcgag
ggcaggcccttcgccgaccgcaaggacgaggtcaacggcgcctaccaggccctgaccaag
cacaccgtgcgccagcggatcctcaccgagcaggtgcgcatcgacggccgcgggctgacg
gacatccgccagctcaccgccgaggtcgaggtcctcccgcgggtgcacggctcggcgatc
ttcgagcgcggcgagacccagatcatgggcgtgaccacgctgaacatgctcaagatggag
cagcagatcgactcgctgtccccggtgaagaccaagcgctacgtccaccactacaacttc
ccgccgtactccaccggcgagaccggccgcgtgggctcgcccaagcgccgcgagatcggc
cacggcgccctggccgagcgggccatcaccccggtgctgccctcccgcgaggagttcccc
tacgcgatccgccaggtctccgaggcgctgggctccaacggctccacgtcgatgggctcc
gtgtgcgcctcgaccctgtcgctgctcaacgccggcgtgcccctgcgcgccccggtcgcc
ggcatcgccatgggcctggtctcggacgaggtcgacggcgagacccgctacgccgccctg
accgacatcctcggcgccgaggacgccctcggcgacatggacttcaaggtcgccggcacc
gccgagttcgtcaccgccatccagctcgacaccaagctcgacgggatcccctcctccgtg
ctggacgccgcgctgacccaggcccgcgaggcccgcctgcacatcctcgaggtgatgacc
ggcgcgatcagcgagcccgacgagatgagcgagttcgccccgcgcgtgatctccgtgacc
gtgcccgtctccaagatcggcgaggtcatcggccccaagggcaagatgatcaaccagatc
caggaggacaccggcaccgacatctccatcgaggacgacggcaccgtctacatcggcgcg
accgacggcccctccgccgaggcggcccgggcggcgatcaacgcgatcgccaacccgcag
gtccccgaggtcggcgagcgctacctgggcaccgtggtcaagaccaccgccttcggcgcg
ttcgtgtcgctgaccccgggcaaggacgggctgctgcacatctcggagctgcgcaagctc
aacgagggcaagcgcgtcaccgacgtcgaggacgtcctcggcgtgggccagaaggtccag
gtggagatcaccaaggtcgacgaccgcggcaagctctccctcgcccccgtcgtggccgag
gagccgggggaggccgccgaggccgagcccgccgaccaggactga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (10)   
   Pfam (10)   
All databases (21)   

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