KEGG   Kryptolebias marmoratus (mangrove rivulus): 108232444
Entry
108232444         CDS       T05608                                 
Symbol
msh4
Name
(RefSeq) mutS protein homolog 4
  KO
K08740  DNA mismatch repair protein MSH4
Organism
kmr  Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:kmr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:kmr03036]
    108232444 (msh4)
Chromosome and associated proteins [BR:kmr03036]
 Eukaryotic type
  Meiosis-specific proteins
   Others
    108232444 (msh4)
SSDB
Motif
Pfam: MutS_V MutS_III MutS_II MutS_IV AAA_14 AAA_22 AAA_23 nSTAND3 AAA_29
Other DBs
NCBI-GeneID: 108232444
NCBI-ProteinID: XP_017265726
Position
LG10:13473907..13480543
AA seq 913 aa
MYHSSTEEVATSGDASEGGQKRSFSFEDSRGPNETTTSCGPVSLSSVLSRKSSDESSSRS
SHGPSLPGMTPGQCHSSSRTGRTPSSLLMSTSDSSSRRCHEETPRFRRTPGSAGPTGTSG
SSGSIVSGASVIVAVVEGRGLARGEIGMASFNLKCPELVLSQFADAGTYAKVITKIHILM
PVEILMPDTASEKGKGTKLYKLITENFPGVTFTAIQRKYFNERKGLEYIQQLCAPEFNTV
LMEVQAKYYCLASAAALLKYLEFLQNSVYASKSLKVSFKGSEQTAMIDSASASNLELVVN
NRDHRSEHTLLGVLNHTKTPGGARRLRSNILEPLVDVDTINVRLDAVQELLQNEELFFGL
KNAISHFLDIDRLLSVLVQIPKQETVQAAEAKITHVIQLKHTLDLVPQLREVLKNCSTAL
LNAYSTTLEDNRFDMILEQIKTVINCDTTYLKGSLNMRTQKCYAVRPNINEFLDIARRAY
TEIVDDIAGLVNQMGEKYGLPMRTSFSTARGFFIQMKLEGVISPEGKLPSEFIKVTKHKN
NYSFTTADLMKMNGRCDEAFREIFHMSYVVICQLLSTIHEHIHCLYKLSDAVSMLDMLLS
LANACTISDYVRPEFTDTLAIKQGRHPILERMARQQPVSNNTYISEGSNFVIITGPNMSG
KSTYLKQVALCQIMAQIGSFVPSEYASFRVADQIFTRIGVDDDFETNSSTFMLEMKEISY
IIHNASDRSLLIIDELGRGTSAEEGIGICHSVCEFLLRLKAFTLFATHFLELCQLESLYP
NVENQHMEVQHMRSGDTGAEQVVYTYLLNRGRSEERHYGLRAAEMTTLPPGVIQEARIIA
SQVSQQLLAKHQTDPETQRQRAVYRLATRLLQTARNSRLDPESLRMYLKGLKRQYEAELQ
AAGPPESFNTEEE
NT seq 2742 nt   +upstreamnt  +downstreamnt
atgtatcacagcagcacggaggaggtagcgacgagcggtgacgcctctgaaggtggacag
aaacgcagtttttcctttgaggacagcagaggaccgaacgaaaccaccacttcctgtggt
cccgtgtcactgtcatctgttctgtcaaggaaaagctcagatgagagcagctccagatca
agccacggtccatcactaccaggaatgaccccaggtcagtgtcacagcagctccaggact
gggaggacaccatcatccctcctcatgtccacctcagatagctcctcccgccgctgccat
gaagaaacaccgagatttagaaggactccgggctccgccgggcccacaggaacaagtggc
tcgtctggatccatagtctccggtgcctctgtgattgtagcagtggttgaagggcgaggt
ttggcaaggggagagataggcatggccagttttaatctgaaatgtccagagcttgtgctc
tctcagtttgcagacgcagggacatatgccaaggttataaccaaaattcacatcttgatg
ccagtggaaatactgatgccagacacagccagtgagaaggggaaaggaacgaagctgtac
aagctgatcactgagaacttcccaggtgtaacttttactgcaatccaacggaagtatttt
aatgagaggaagggactggagtacattcagcagctgtgtgctccagagtttaacactgtc
cttatggaagtacaagcaaagtactattgcctagcatcagcagctgctttgctgaaatac
ctagaatttcttcagaactctgtttatgcctcaaagtcacttaaagtgagctttaaaggg
agcgagcagacagctatgattgactcagcatctgcctctaacttagagttagtggttaat
aacagagatcacagaagcgagcacacacttttaggggtactcaatcacacaaaaactccc
ggtggagccaggagactgcgctctaatattctggagcctctggtcgatgtggacaccatc
aacgtgcgcttggatgctgtacaagagctgctgcagaatgaggagctcttctttgggctg
aagaatgcgataagtcatttcctggacatcgaccggctgctttctgttcttgtccaaatc
ccaaagcaggaaacggttcaagctgctgaagctaagattactcatgtcattcaactgaag
cacacactggatctggtgccacagttaagggaagtgttgaagaactgcagcacagctcta
ctgaatgcgtacagcaccacactggaagacaacagatttgacatgatcctcgagcagatc
aagacagtgataaactgtgacaccacatatttgaaaggcagcctgaacatgcgcacccag
aagtgttatgccgtgcggcctaacatcaacgagttcctcgacatcgcccgcagagcttac
actgagatagtcgacgacattgcagggcttgtgaaccagatgggggagaagtatggcttg
ccgatgcgcactagcttcagtacagctcgaggtttcttcatccagatgaagcttgaaggc
gtcatttcacccgagggcaaactcccctcggagttcatcaaggttaccaagcacaagaac
aactatagcttcaccactgcagacttgatgaagatgaatggacgctgtgatgaagccttc
agggagatttttcacatgtcctatgtggtgatatgtcaactgcttagcaccatccacgag
cacattcactgcctgtataaactctctgatgctgtgtccatgttggacatgttgctgtcg
ctggctaatgcatgcacaatctcagactatgttcgtcctgagtttacagacactctggcc
atcaagcaaggtcgtcaccccattctggagcgaatggctcggcagcagcctgtgtcaaac
aatacctacatctctgagggcagcaactttgtcatcataacaggacccaacatgagtggc
aaatccacctacctcaaacaggtggcgctgtgtcagatcatggctcaaatcggctctttt
gttccctctgagtacgcctcttttcgtgttgccgatcagattttcaccagaattggtgta
gatgatgattttgaaactaactcctccacttttatgttggaaatgaaagagatctcctac
ataatccacaatgcgagtgacagatccttgctcatcatagatgagttggggcgtggcacg
agtgccgaggagggcatcggcatctgccactcggtctgcgagtttctccttcgcctaaag
gcgttcactctgtttgccacacacttcctggagctgtgtcagctggagtctctctacccg
aacgtggagaaccagcacatggaggttcagcacatgcgcagcggcgacaccggcgcagag
caagtggtgtatacatatctgctgaaccgagggcgctccgaagaaaggcactacggtttg
agggcagcagaaatgaccacacttcctccaggtgtaatccaagaggccaggattatcgct
tcccaagtcagccagcagcttttggccaaacatcaaactgatccagaaactcagaggcag
agagcggtgtaccgcctggccactcgcctcctacagactgccagaaactccaggcttgac
cctgaaagcctgcgtatgtatctgaaggggctgaagaggcagtatgaggccgagctgcag
gctgcggggccaccagagagcttcaacacagaggaggaataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (9)   
   Pfam (9)   
All databases (20)   

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