KEGG   Kryptolebias marmoratus (mangrove rivulus): 108239338
Entry
108239338         CDS       T05608                                 
Symbol
brip1
Name
(RefSeq) Fanconi anemia group J protein
  KO
K15362  fanconi anemia group J protein [EC:5.6.2.3]
Organism
kmr  Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr03440  Homologous recombination
kmr03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:kmr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    108239338 (brip1)
   03460 Fanconi anemia pathway
    108239338 (brip1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:kmr03400]
    108239338 (brip1)
Enzymes [BR:kmr01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     108239338 (brip1)
DNA repair and recombination proteins [BR:kmr03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    BRCA1-B complex
     108239338 (brip1)
   FA (Fanconi anemia) pathway
    Downstream FA components
     108239338 (brip1)
SSDB
Motif
Pfam: Helicase_C_2 DEAD_2 DEAD
Other DBs
NCBI-GeneID: 108239338
NCBI-ProteinID: XP_017277483
Position
LG2:25796914..25860885
AA seq 1205 aa
MAASSVEYTIGGVKIHFPCRAYPSQLAMMNSIIRGLNYGQHCLLESPTGSGKSLALLCSA
LGWQQAQTAKLQEQGGSAGDWSHSGKHSGDCKTLETPAPCQCACHSKAAATAQAAVVDLT
VSPCKETVLTSPTAPDHVPLPEEPQDKKPTIASCLSEKFQGSLSSQCDKEDDFRTDRKRL
RTAEHKSHKRQRLQKGVIFIDDDEPELKKEPSGPESWSPASKHQTDGLSTSCHASEPCTH
CLCASPKDGAKDKDKGGKKKIPKIFFGTRTHKQITQIAHELKRTVYSGVPMAILSSRDHT
CVNPDVVPHFNRNERCKDLLEAKDGRSCRYYHGVQKMRDQQTLQWVHGLREAWDVEDLVS
LGKRLHSCSYYAARELMQGASIIFCPYNYLLDPMIRESMEIDLAGQILVLDEAHNIEDCA
RESASFTVDHSTLKMCRDDLDGMVNGNIRRSKHEPLRDFCYVLFNWMQESHDLLSERGYE
IASKVWSGKEIQSIFHSLGITADSVRILEQNLAAVLEKEERVGLVNGKEDMVQVPTISSP
TSAVLKSLFMVLDFLYRDNSRFAEDYRIALQRTYAWTNQVPLDVPDAQGFLVRARPRHRQ
NTRVKKEVLTLSFWCLNPAVAFSDLSGSVHSIVLTSGTLSPMGSFSSELGVKFTIQLEAN
HVINKSQVWVGTVGAGPQGRKLCATFQHAETFAFQDEVGALLLRVCQVMTKGVLCFLPSY
KMMDKLRDRWTNTGLWNQLEEQKTVITEPRGGSKGEFDELLQMYYDAIKFCEGTDGALLI
AVCRGKVSEGLDFTDDNARAVVTIGIPFPNIKDLQVELKMKYNDQHCKSRGLLPGHRWYE
IQAYRALNQALGRCIRHRNDWGALILVDDRYRNNPNKYITGLSKWVRQLVQHHNTFNNAM
QSLVAFSQGQQKVEGAPADSQTFSSVGLSTRNQSLTEAPELQLPSSCDKPPESQQDTSTQ
LKAEKNKEAEPLKTLPFAPAKLLSDKRGAAQRLYSIFTCSPISTNFKKPIFKEKTQSDSS
LHERKQMPSPPVSPEALCPEQRTENSSSEIKKESNNPTTDPPSCESETPSVNDEDDEDQT
IFFTPELFEGEEDEGSPQKENAESTLRFVPKTESPPPLSEEPFGSEQDHRLATTLDGLAS
VSVREESTELSQEQKEETREQEQSEKGGGHENQSRQSSKRLHRLSRSRQRVPLTQTGNHQ
TQHPE
NT seq 3618 nt   +upstreamnt  +downstreamnt
atggcagcatcctctgtggagtacaccatcggcggggtaaagatccactttccctgcagg
gcttacccatcccagttggccatgatgaattcaataataagagggttgaactacggtcag
cactgtttgctggagagtcccacaggcagtggaaaaagtctggccttactctgctccgct
ctgggctggcagcaagcacagacggctaaactccaggaacaaggtggttccgcgggagac
tggagtcactcaggtaaacattcaggtgactgtaagacgttagaaactcccgccccgtgt
cagtgtgcgtgccacagcaaagcagcagcgacggcccaagcagctgttgtggatctcact
gtgtcaccctgcaaagagactgtgctgacctcacccacagcaccagaccacgtgccatta
ccagaagagcctcaagacaaaaaaccaactatagcctcttgtctgtctgaaaagttccaa
ggttctctgagttctcagtgtgacaaagaggatgactttcgaacagacagaaaacgcctt
cgtaccgccgagcacaagagccataagaggcagcgtctacagaagggagttatcttcata
gatgacgacgaacctgagctgaaaaaggagccatcaggtcctgagagttggagcccagca
tcaaaacaccagacagatggtttgtccacatcatgccatgcctctgaaccctgcacccac
tgcctgtgtgcgtcacccaaggacggtgcgaaggacaaagacaaaggtggcaaaaagaag
attccgaagattttctttggaacgcgcacgcataaacagataactcagattgcgcacgag
ctgaagcgcaccgtttactctggcgtgccgatggccatcttgtccagcagggatcacacc
tgtgtcaatccagatgtggtgcctcatttcaaccgcaacgagcgatgcaaggatctgctg
gaggccaaagatggaaggtcgtgccggtactaccacggcgttcagaagatgcgggaccag
cagacactacagtgggttcatggactgcgtgaagcatgggacgtcgaggacctggtctcg
ctgggaaaacgtctccactcgtgctcctactacgctgctcgtgaacttatgcagggggcc
tccatcatcttttgtccctacaactatctgctggacccaatgatcagggagagtatggag
attgacctggcaggccagatcttggtgctggacgaggcccacaacattgaagactgcgcg
agggagagcgccagcttcactgtggaccacagcactctgaagatgtgcagggatgatctg
gacggcatggtcaacggcaacattagacgctccaagcacgagcctctcagagacttctgc
tacgtcttattcaactggatgcaagagagccacgacttgctgtctgaacgtggatacgag
attgccagcaaagtctggagcgggaaggagattcagagcatctttcatagcttgggcatc
acagccgacagcgtacgcattctggagcaaaacctggcagcggtgttagagaaagaagag
cgtgtcgggttggtcaatggcaaggaggacatggtgcaggtcccaaccatcagctcgccc
acctccgctgtgctcaaaagcctcttcatggtgctggattttctctacagggacaacagc
cggtttgctgaggattaccgcatagctctgcagaggacctacgcttggacaaaccaggtc
ccgctcgatgtccctgatgctcaaggctttttggttcgggctcgtcctcgacaccgccag
aacacgcgggtcaaaaaagaagtcctgacgctgagtttctggtgtctcaacccagctgtg
gccttctctgacttgagtgggtcagtgcacagcattgtgctgacatcagggaccctatca
cccatgggctcgttttcctctgaacttggtgtgaaattcaccattcagctggaggccaac
catgtgatcaacaagtcccaggtttgggtgggtactgttggtgcaggaccccaaggccga
aaactctgtgccacctttcagcacgctgaaacgttcgcctttcaggacgaggtgggcgcc
ctgctgctccgtgtctgccaggtcatgaccaagggtgtgctctgctttttgccttcctac
aagatgatggacaagctgcgagaccgttggaccaacactggcctgtggaatcagctggaa
gaacagaaaactgtcatcacagaacctcgcgggggcagcaagggagagtttgatgagctg
cttcagatgtactacgacgccattaaattctgcgaagggacggatggtgcactgctcatt
gctgtgtgcaggggtaaggtcagcgaaggcctcgactttacagatgacaatgccagggca
gtggtcactattggaattccctttccaaatatcaaagaccttcaggtggaactgaagatg
aagtataatgaccagcactgcaagtcccgaggtcttcttcctggccatcgctggtatgag
attcaggcctacagagctctcaaccaggccctagggaggtgcatccgccacaggaatgac
tggggcgccttaattcttgtggatgaccggtataggaataatcccaataagtacatcaca
ggtttgtctaaatgggtccgtcaactcgttcagcatcacaacaccttcaacaacgccatg
cagtctctggtagcattctctcaggggcagcagaaggtggagggggcccctgctgacagc
cagaccttcagctctgttggcttatcaaccaggaatcaaagtctgaccgaagctccagag
cttcagctacccagctcatgtgacaaaccacctgaatcccagcaggacacaagtacacaa
ctgaaagctgaaaagaataaagaagcagagccattgaagacgttgccgttcgccccggcg
aagctcctctctgataagcgcggagccgctcagcgtctgtatagcattttcacctgcagc
cccataagcaccaacttcaagaagccgatatttaaagagaaaacacaaagtgattccagc
cttcatgagagaaagcagatgccctccccaccagtgagtcctgaggccctttgccctgag
cagagaactgaaaacagttccagtgaaataaaaaaagaatccaacaatcccactactgac
ccccccagctgtgaaagtgaaaccccctcagtgaacgatgaagacgatgaggaccagact
attttctttactccagaactttttgagggtgaagaagatgaaggtagcccacaaaaagag
aatgctgagtcaactctcagatttgtcccaaagacggagagcccacccccgctgtcagag
gagccgtttgggtctgagcaggaccacaggttagccaccactttggatggactggcttct
gtttcagtcagggaggagagcacagagctgtcacaagaacagaaagaggaaacgagagag
caggaacaaagtgagaaaggagggggacatgagaaccagagcagacagagcagcaaaaga
cttcacaggctgtccaggtccaggcagagagtccccctcactcagacaggtaaccaccaa
actcagcacccagaatag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (16)   

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