KEGG   Kryptolebias marmoratus (mangrove rivulus): 108241931
Entry
108241931         CDS       T05608                                 
Name
(RefSeq) E3 ubiquitin-protein ligase NHLRC1
  KO
K10602  E3 ubiquitin-protein ligase NHLRC1 [EC:2.3.2.27]
Organism
kmr  Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:kmr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    108241931
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:kmr04121]
    108241931
Enzymes [BR:kmr01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     108241931
Ubiquitin system [BR:kmr04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    108241931
SSDB
Motif
Pfam: NHL zf-RING_5 zf-RING_UBOX zf-RING_2 zf-C3HC4_3 zf-C3HC4_4 zf-C3HC4 zf-C3HC4_2 Sina_ZnF DUF5711
Other DBs
NCBI-GeneID: 108241931
NCBI-ProteinID: XP_017281917
Position
LG16:13840333..13843406
AA seq 399 aa
MDRSPGLLRHGCLSPEGTLREIQISLLECKVCFELFNSQQRERRPQNLSCGHVLCLECVT
ALSHPVLRKLECPFCRQLCSADGTSHCQVLSDLQQLLLSRSPSSSTPRPPPLCRTKGGPS
SSTGLRLRSVFGGWGTLVNPTGIAVLGPSGAVVVVHDGAKRVAVFSQQGRKLNSFGQRGK
AVGDICYPVDVAVSPAGCVVVTDAGDKAVKVFTSRGSHVVTVRDSFQLPWGVDTNSGGHI
LVSDVQAGMLSLLKVDYGQGVVLERRTAVSDLRCPRAVACCRATGNTAVMEHLAEEHQHR
RLKVFSQDFQLLHQVDGFSLSLQSSVRLNMSGVAFGGDGDVVLTDSDQGLVCSLGKLQSD
PALMPLVGNHLVRPVGLVVLNDTFIVLDGGDHTVKIYSA
NT seq 1200 nt   +upstreamnt  +downstreamnt
atggacaggagtcccggcctcctgcgccacggctgtctgagtcccgagggcaccctgagg
gagatccagatcagcttactggagtgtaaagtctgcttcgagctgtttaattctcagcag
agggagcgcaggccgcagaacctctcctgcggacacgtcctctgcctggaatgcgtcacg
gctctgtcccaccctgtcctcaggaagctggagtgtccgttctgccgccagctgtgcagc
gcggacggcacctcccactgccaggtccttagtgacctgcagcagctcctgttgtcccgg
agcccctcatcctccactcctcgtcctcctcctctttgcaggactaaaggaggaccgtcc
tcatccacaggtctgcgtcttcgctccgtgtttggaggctgggggactctcgtcaacccc
actggaatcgccgttttggggccctcgggagctgtagttgtggtgcacgacggtgcgaag
agggtggcggtgttcagccagcaggggaggaagctgaacagtttcgggcaacggggaaaa
gccgtcggggacatctgctacccggtggacgtggcggtgtctcccgccggctgcgttgtg
gtgacggacgcaggggacaaggccgtgaaggtgttcacctccagggggagtcacgtggtc
acggtgagggactccttccagctgccctggggggtggacacaaacagcggcgggcacatc
ctggtttcagacgtccaggcgggcatgctgtccctgctgaaggtggactacggccagggc
gttgttctggagcgtcgcaccgccgtgtccgaccttcggtgtccccgagccgtggcctgc
tgccgagcgactgggaatacggcggtgatggagcatctggccgaggagcaccaacacagg
aggctgaaagtcttctcccaggacttccagctcctccaccaggtggacggcttcagcctg
tccctgcagtccagcgtgaggctgaacatgtcaggggtggcgtttggcggagacggagac
gtggtgctgacggactcagatcaggggctggtttgtagcttagggaagcttcagagtgat
ccggcgctcatgccgctcgtggggaatcacctcgtccggccggtcgggctggtggtcctg
aacgacaccttcatcgtcctggacggaggggaccacaccgtgaagatttactctgcctaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (10)   
   Pfam (10)   
All databases (22)   

Download RDF
DBGET integrated database retrieval system