KEGG   Kryptolebias marmoratus (mangrove rivulus): 108243639
Entry
108243639         CDS       T05608                                 
Symbol
chd6
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 6
  KO
K14436  chromodomain-helicase-DNA-binding protein 6 [EC:5.6.2.-]
Organism
kmr  Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:kmr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:kmr03036]
    108243639 (chd6)
Chromosome and associated proteins [BR:kmr03036]
 Eukaryotic type
  Chromatin remodeling factors
   Other chromatin remodeling factors
    108243639 (chd6)
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C Chromo ResIII DEAD HDA2-3 MUN
Other DBs
NCBI-GeneID: 108243639
NCBI-ProteinID: XP_024864605
Position
LG4:1513627..1555762
AA seq 2844 aa
MKILKKDKQQMFTGLLKHTPPPPAAAASDQDKNAQTAVPTIPRGHLVVGPKDQLRLLTPV
GSAATPNHCAAVGVHAMKHSGGAPRPPSSLSEEDDGGGGGGRVKKKRKKKDRREWERGGA
DGEEKDSSKPKKRKEEKGPMVLTLRRSKEPKERKGRRRKDADRSKTPEPAQVPVKVPGKR
GRKPKIKVLPPEATNQAPPVAAGQVNHAQAAQSHGKRQGQANSKTPAPTAPKQRGRKPKD
PGAAPVEKKKKGKRRNQELQEAGESDDATSMSALNMGGEDSQDPLDNSKRRSGRQVKRRK
YNEDLDFKVVDDDGETIAVLGAGRISALNATALAWQAEEPPEDEANIIEKILAVRKGKKE
ASPEDQSDDTEEFYVKYRNFSYLHCKWATLEELEKDPRIHQKIKRFRTKQAQMKHLFTEP
DEDLFNPDYVEVDRVLEVAVTTDTETGEEVTHYLVKWCSLSYEEATWELQEDVDPEKIKE
FEEIQKPPPDLRHAERPPPEKWQKLERSRDYRNGNQLREYQLEGMNWLLFNWYNRKNCIL
ADEMGLGKTIQSITFLYEIFSMGIRGPFLIIAPLSTITNWEREFRTWTHMNVIVYHGSQI
SRQMILQYEMFYRDAQGNAVPGVLKFHGLITTFEMIMADCPELKKLQWRCVVIDEAHRLK
NRNCKLLEGLKLMNLEHKVLLTGTPLQNSVEELFSLLNFLEPQQFPSESSFLDEFGDLKT
DEQVKKLQSILKPMMLRRLKDDVEKNLAPKEETIIEVELTNIQKKYYRALLEKNFSFLSK
GANQHNMPNLINTMMELRKCCNHPYLITGAEEKILESFRKSHSPEAADFQLQAMIQAAGK
LVLIDKLLPKLLAGGHKVLVFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAAIDR
FCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKV
YRLITRNSYEREMFDKASLKLGLDKAVLQDINRKGSLNGVQQLSKLEVEDLLKKGAYGAL
MDEEDEGSKFCEEDIDQILQRRTQTITIQSEGKGSTFAKASFVSSGNRTDISLDDPNFWQ
KWAKIAEVEIDSRSEKESLVIDTPRVRKQTRHYNSFEDDELMEFSELDSDSEERPCRTRR
LGERTRRYLRAECFRVEKNLLIFGWGRWKDILNHGRFKWHLTERDMEVICRALLVYCLKH
YKGDDKIKSFIWDLIAPSKDGQDQALLNHSGLSAPVPRGRKGKKLKNQLNVPDVKNADWL
VHCNPEVVLQDESYKKHLKQHCNKVLLRVRMLYYLKVEVLGEAATQAQEGEPASKLDVAL
PDIDYIEIPVTWWDADADKSLLIGVHKHGYERYNAMRADPDLCFLERVGMPDVTALTAEQ
GGGEGPAEAADSSCKADEAKDEAEVKANGGEDRDESSKGEETCSSTDASEKPDSSGQDSQ
MSADLSAQDGPLVTTTTVGTGTGVASLHVVQARPLWPTGPALTARFRRLITAYQRFTLRR
EPLLRPDFLLHDGLVGMAMGGAPAAHGHHAGGPLAWQLGEELRRCSVVSTEPDPLFLEWQ
RRWTRREQADFYRTVSSFGVVYDPERKAFDWSQFRALARLERKTDESLERYFNSFVNMCR
TACKLPPRKEEGLVDPGVLVEPLTEERAARTLYRIELLRKIREQVLRHPLLSARLQLCRP
SLYLPVWWESGKHDRDLLIGAARHGLSRTDFYILNDPQLSFLEAHRNYVRRHPAHLHPHA
HHPGISSSSSSSSHVQLAHPHCCLYDSGLGHHSPQPPEYPHQASNHHHHHQQQQAPPPSA
PSPSSSSHLHPPPLDGHDSAPASLGLVPGSRVDFLDCAPLDESLELGALQHDAMSADALH
GGKASKDALNGFPFNSAAGGQSMLNSYGVGGADLDSKLRSDVLVGEQGSSEETGLMAPSV
ELDQLQAPWDSADHTSPADHMFNESDPILGPSALETGFLEEEDEEAQGGDRAGEEGGTLE
ECLGLPPSSPPSHPSTGDSVEPLSSSYMLFKDIGVNEEASEDQTDLSASPPLPYVPPPPL
SLSDIAPHEPQDVSESLAHPVEDGEERDGSAAFEFEEKEEEEVEDLSKETAELGAEEEDR
NSRDDNPAIEQDDGEPDDSEEVMEQMENFEDVEDDEDLTEELDQERSFVCPDDPAEQVHG
LILYQTEPSAGNSLDTEVFLSNDTGEFVERKVSPQSSGGADQVDEISEGCLDRAADGVEE
KFENIYPEFAEPSCSSVLQQSKCDRTGLQVSMDQNHGDSKDRLMDPDEIKADSDIDSKPL
DLKFSVQPNGGQKTPEQLLVPVKVEETKPEPAEDVCADSSEVKHSAFLSYPVKSEDLETK
AEQFEFPVRAQSLEVKPEDLTFPMKAENFSTKPEALRFGAEVKPPDLRFPACSDKFKTES
KPEGLRFPSLPEAKPEVLGFTAYPDSSEVKPEAKPEGLEFKAEMKQEMLEADSTVLTPKL
EQADGMVDSSGGLVLKGHVKEEKPSTPVPAVDGFPGSPRFAAPVSMCEIPDSLHEAREPT
IAQLLQEKALYSFSEWPKDRVIINRLDSICHAILKGKWPSSSEQYDSPSSLAANSCLPNS
LAPQHQHRAGFLPTTAPGSVPAQPRVQQTGAGLGFSIPPPLTRLPKYVPRGGACGRGAWR
LTSLPLLQERLVAPPFLPELKRAGGRRSFDYEAAAAAAAKILAGKSVSLSLTTATATTSS
GGEKVPVVAPPSHRSGAMLINGWQEAAIDLTKSSGEISTTSGAGTSEAAGIGQSSAAAGK
VAALPPITAPLPGPVGLDMSGILQAGLIHPVTGQIVNGSLRGDDSLRRRRGRRRNVEALY
SEFAKSRGLHLPDAQGRVEVISHS
NT seq 8532 nt   +upstreamnt  +downstreamnt
atgaagatcctgaagaaggacaagcagcagatgttcactggcctcctgaagcacacgcct
cctccccccgccgcagccgcctcggaccaagacaagaacgcacaaaccgcggttcccaca
atcccacgggggcacctggtcgtcggcccgaaggaccagctccgcctcctcacccccgtg
ggcagcgcggcgacgcccaatcactgcgctgcggttggggtccacgccatgaagcactcc
ggaggagccccgcgacccccgtcctctctgagcgaggaggacgatggcggaggaggagga
ggcagggtgaagaagaagaggaagaaaaaggacaggagggaatgggagcgaggaggagcc
gacggcgaggagaaggacagcagcaaaccaaagaaacggaaggaggagaagggcccgatg
gtgctgaccctgaggaggagcaaagagcccaaagagaggaagggccgccgcaggaaagac
gccgacaggagcaaaaccccagaaccagctcaggttcccgtgaaggttcccggcaaaaga
ggaaggaaaccgaagatcaaagtccttcctccagaggccacgaatcaagcccccccggtc
gccgcggggcaggtgaaccacgcccaggccgcccaaagccacggaaagagacaaggccag
gccaacagcaagacgccggcccccacggctccgaaacagaggggccggaaacccaaagat
cctggcgcagcgccggtggagaagaagaagaaggggaagaggagaaaccaggagctgcag
gaggcaggggagagtgacgacgctacctcaatgtcagctctcaacatggggggcgaggac
agccaggaccccctggataactctaagcggcgttccgggcgccaggtcaagcgcaggaag
tacaacgaggacctggacttcaaggtggtggacgacgacggggagacgatcgccgtcctc
ggagccgggcgcatctcggcgctcaacgccacggcgctggcgtggcaggccgaagagccg
ccggaggacgaggccaacatcatcgagaaaatcctggcggtcagaaaagggaagaaggag
gcttcacccgaggaccaatcagacgacaccgaggagttttacgtcaaatacagaaacttc
tcctacctgcactgtaagtgggccactttggaagaactggagaaggatcccaggatccac
cagaagattaaacgcttcaggaccaaacaggctcagatgaagcatctgttcaccgagccc
gatgaggacctttttaacccggattacgtcgaggtggaccgggtcctggaagtggccgtt
accacggacacagagaccggagaggaggtgacccattacctcgtgaagtggtgcagcctg
tcctacgaggaggccacgtgggagctgcaggaggacgtggacccagagaagatcaaggag
ttcgaggagatccagaaaccgccgccggacctgagacacgcggagcgcccgcctccggaa
aaatggcagaagttggagcgttcgcgggattaccgtaacgggaaccagctccgagaatac
cagctggaggggatgaactggttgttgttcaactggtacaacaggaaaaactgcatcctg
gcggacgaaatgggtttggggaaaaccatccagtccatcaccttcctgtacgagatcttc
agcatggggatccgcgggcccttcctcatcatcgcgccgctgtccaccatcaccaactgg
gagagggagttccgcacgtggacgcacatgaacgtcatcgtgtaccacggctcgcagatc
agccggcagatgatcctgcagtacgagatgttttacagggacgcgcagggtaacgcagtc
ccaggtgtgctgaagtttcacggactcatcaccaccttcgagatgatcatggccgactgc
ccggagctgaagaagctgcagtggcgctgcgttgtgatcgatgaagcccaccggctgaag
aaccggaactgcaagctgctggaggggctcaagctcatgaacctggaacacaaggttctg
ctgacaggaacccctctgcagaactcggtggaggagctcttcagtttgttgaacttcctg
gagccccagcagtttccctcagagagctccttcctggacgagtttggagacctgaagacg
gacgagcaggtgaagaagcttcagtcgattctgaagcccatgatgctgaggaggctgaag
gatgatgtagaaaagaatctggcacctaaagaggagaccatcatagaggtggagctaacg
aacatccagaagaaatactaccgcgccctgctggagaagaacttctccttcctctccaaa
ggagccaaccaacacaacatgcccaacctcatcaacaccatgatggagctccgcaagtgc
tgcaaccacccctacctgatcacaggagccgaggagaagatcctggagagcttcaggaag
agccacagtccggaggcggcagacttccagctgcaggccatgatccaggccgcggggaag
ctggttctgatcgacaagctgctgcccaaactgctggccgggggacacaaggttctggtc
ttctcccagatggtccgctgcctggacatcctggaggactacctcattcagagacgctac
acgtatgaacgcatcgacggccgcgtgcgagggaacctgcggcaggccgccattgaccgc
ttctgtaagccggactcggaccgcttcgtgttcctgctctgcacccgagccggaggactg
gggatcaacctgacggccgcggacacctgcatcatcttcgactcggactggaaccctcag
aacgacctgcaggctcaggctcgctgccatcggatcggtcagagcaaagccgtgaaagtc
tacagactcatcaccaggaactcgtacgagagggaaatgttcgacaaggccagtctgaag
ctcggcctggacaaagcagtccttcaagacatcaaccgcaaagggagtctgaacggggtg
cagcagctctccaaactggaagtggaggacttgttgaaaaaaggggcgtacggcgcgctg
atggacgaagaagatgagggctccaagttctgcgaggaggacatcgatcagattcttcag
agacgaactcagaccatcaccatccagtctgaggggaagggctccaccttcgcaaaggcc
agctttgtctcgtccgggaacaggacagacatttcactggacgacccgaacttctggcag
aaatgggccaagatcgctgaagtggagatcgactccagatcagagaaggagtccctggtg
atcgacacgccccgggtcaggaagcagacccgtcactacaactccttcgaggatgacgag
ctgatggagttctccgagctggacagcgactcggaggagaggccctgcaggacccgccgc
ctgggggaacgcacccggcggtacctccgagccgagtgtttccgggtcgagaagaatctt
ctgatctttgggtgggggcggtggaaggacatcctgaaccacgggcgcttcaagtggcac
ctgactgagagggacatggaggtgatctgcagggctctgctggtttactgcctgaaacac
tacaaaggtgacgataagatcaaaagcttcatctgggatctgatcgctccgtctaaagac
gggcaggaccaggcgctgctcaatcactccggtctgtcggctccggttcctcggggcagg
aagggcaagaagctgaagaatcagctgaacgttcctgatgtgaagaacgccgactggctg
gtccactgtaaccccgaggtggttctgcaggacgagagctacaagaagcacctcaagcag
cactgcaacaaggtcctgctgagggtccggatgctgtactacctgaaggtggaggttctg
ggggaggctgccacccaggctcaggagggagaacctgccagtaaactggacgtggcgctg
cccgacatcgactacatcgagattcctgtgacgtggtgggacgctgacgccgacaagtct
ctcctcatcggggtccacaaacacggatacgagcgctacaacgccatgcgcgccgatccg
gacctgtgtttcctggaacgagtcgggatgccggacgtcacggctctgacggccgagcaa
ggcggaggggaggggcctgctgaagccgccgacagcagctgtaaggcggacgaggcgaag
gacgaggcagaagtcaaagctaacggaggcgaggatcgagacgagagcagcaagggggag
gagacctgctccagcaccgacgcctccgagaagccggacagttcgggtcaagactctcag
atgtccgctgacctgagcgctcaggacggaccgctggttaccacgacgacggtagggacg
gggaccggggtggcgtctctccatgtggtccaggcccggcccctgtggcccacgggcccc
gccctcacggcccgtttccgccgcctgatcaccgcctaccagcgcttcacgctgcgccgg
gagccgctgctgaggcccgacttcctgctccacgacggcctggtcggcatggcgatggga
ggggccccggccgctcacggtcaccacgccggcgggccgctggcctggcagctgggcgaa
gagctgcggaggtgttcggtggtctccacagaaccggaccctctgttcctggagtggcag
cggaggtggacccgccgggaacaggcagacttttaccgcacggtgtcgtccttcggggtc
gtctacgacccggagaggaaggccttcgactggtcccagttcagagcgctggcccggcta
gagaggaaaacggacgagagtctggagagatactttaattcgtttgtcaacatgtgcagg
acggcgtgcaaacttcctccgaggaaggaagaagggttggtggatcctggggttctggtg
gagccgctgacagaagaacgagcagcgaggacgctttatcgcatcgagctgctgaggaag
atcagagagcaggttctgcgccaccccctcctgtcggcccgcctccagctgtgccgcccc
tccctctacctgcccgtctggtgggagagcggtaaacacgaccgcgacctcctcatcggg
gcggcgcgccacggcctgagccgcaccgacttctacatcctgaatgacccgcagctcagc
ttcctggaggcccacaggaactacgtcaggcgccaccccgctcaccttcatcctcacgcc
caccatcctggaatctcctcctcatcttcctcgtcgtcccacgtgcagctcgctcaccct
cactgctgcctctacgactcagggcttggacatcactccccgcagcctcccgagtacccc
caccaggcctccaaccaccaccaccatcaccagcagcagcaggcacctcctccgtctgct
ccctccccttcctcttcctctcacctccaccccccgcccctggatggccacgactcggcc
cccgccagcctgggtctggttcccgggtcgcgggtggacttcctggactgcgctcccctg
gatgagagcctggagctgggcgccctgcagcacgacgccatgtctgcagacgctctgcac
ggagggaaggcctccaaagatgccctgaacggcttccccttcaactcggcggccggaggt
cagagcatgctgaactcgtacggtgtcgggggggcagacctggactccaaactcaggagc
gatgtgctggttggtgagcagggctcgtcggaggaaacggggctgatggcgccgtcggtg
gagctggatcagctacaggctccctgggacagcgccgaccacaccagccccgctgaccac
atgttcaacgagtccgacccgatcctgggtccgtccgccctggagacgggcttcctggag
gaggaggacgaggaggctcagggaggagaccgagcgggggaggaaggagggactctggag
gagtgtctgggcctcccgccgtcgtcccccccgtcccacccttcgaccggagactctgtg
gagccgctgtcttcgagctacatgctcttcaaggacatcggggtgaacgaagaggccagc
gaggatcaaacggacctgtcggcgagccctcctctcccctacgtcccccctcctcccctc
tcgctgtccgacatcgccccccacgagccgcaggacgtctccgagagcctcgcccatccc
gtggaggacggagaggagcgggacgggagcgctgcctttgagttcgaggagaaggaggaa
gaggaggtggaggacctgtcgaaggagaccgcagagctgggtgcagaagaagaagatcgg
aactcacgggacgataatccagccattgagcaggacgacggagaaccggatgacagcgag
gaggtcatggagcaaatggagaactttgaggacgtggaggacgatgaggacttaactgaa
gaacttgatcaggagaggagctttgtgtgtccagacgatccagcagagcaggtccacggc
ttgatcttgtaccagacagaaccttctgcagggaattctctggacactgaagtgttcctg
agcaatgacaccggagagttcgtagagaggaaggtgagcccgcagagttctggaggagcg
gatcaggtcgacgagatctccgaaggctgtttggatcgagctgccgacggagtggaagag
aagttcgagaacatttatccggagtttgcagagccttcctgttcttctgtcctgcagcag
tcaaagtgtgacagaaccgggctccaagtctccatggaccagaaccatggagacagcaaa
gaccgtctgatggatcccgatgaaattaaagcagattcagatatcgactcaaagccgttg
gatctaaaattttctgtccaaccaaacggaggacagaagacaccagagcagctgctggtt
ccggtgaaggttgaggagacgaaaccagaacctgccgaggacgtctgcgccgacagctcc
gaagtcaaacattctgctttcctgtcctaccccgtgaaatctgaagacttggagaccaaa
gccgaacagtttgagtttcctgtcagagctcagtccctggaggtgaaacctgaagatctc
acgtttcccatgaaggccgagaatttcagcaccaaacccgaagctctccggtttggagct
gaagtcaaaccgccggatctgcggtttcctgcctgctccgacaagttcaagaccgaatca
aagcccgaaggtttgaggtttccgtctctgcctgaagcgaagcccgaggttctggggttc
acagcgtaccccgacagctccgaggtcaaacccgaggccaagccggagggcctggagttc
aaagccgagatgaagcaggagatgctggaggccgacagcacggtcctgaccccgaagctg
gagcaggccgacggcatggtggactcgtccggaggtctggttctgaaaggtcacgtgaag
gaggagaagccgagcactccagttcccgcggtggacggttttcccggcagtcccaggttt
gcggcgccggtttccatgtgtgagattcccgacagcctgcatgaagccagagagccgacg
atcgctcagctgctgcaggagaaagctctgtactccttctccgagtggccgaaggaccga
gttatcatcaaccgcctggacagcatctgccacgccatcctgaagggaaaatggccgtcg
tccagcgagcagtacgactcgccgagctcgctggccgccaactcctgtctgcccaacagc
ttagccccgcagcaccaacaccgagccggtttcctccccaccactgcccctggttccgtc
ccggcccagcccagggtccagcagaccggagcgggtctgggcttctccatcccgccgccg
ctgacccgcctccccaagtacgtgccgcggggcggcgcttgcgggcgcggagcttggcgc
ctcacctccttgcctctcttacaggagaggcttgtggctccgcccttcctccctgagctc
aaacgagcaggaggtcgaaggtcgtttgactacgaggctgctgccgccgcagccgccaag
attttagctggaaagtctgtgtcgctgagcctcaccaccgccaccgccactaccagctcc
ggtggcgagaaggtgccagtggtggctccgccctctcaccgctcgggagccatgttgata
aacggctggcaggaagcggccatagatctgaccaagtcttcgggagaaataagcacgacc
agcggcgccgggacaagcgaagcggcaggaatcggccaatccagcgccgcggctggaaag
gtggcggcgctgccccccatcaccgccccgttaccgggcccggttggactggacatgtcc
gggatcctgcaggcggggcttatccaccccgtcacgggacagatcgtcaacgggagcctg
aggggagacgactctctgaggaggaggaggggccggaggagaaacgtggaagctctgtac
tccgagttcgccaagagccgaggactgcacctccccgacgctcagggtcgcgtcgaggtc
atcagccactcc

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (16)   

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