KEGG   Kryptolebias marmoratus (mangrove rivulus): 108243781
Entry
108243781         CDS       T05608                                 
Symbol
dhx58
Name
(RefSeq) probable ATP-dependent RNA helicase DHX58
  KO
K12649  ATP-dependent RNA helicase DHX58 [EC:5.6.2.6]
Organism
kmr  Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr04622  RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:kmr00001]
 09150 Organismal Systems
  09151 Immune system
   04622 RIG-I-like receptor signaling pathway
    108243781 (dhx58)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04054 Pattern recognition receptors [BR:kmr04054]
    108243781 (dhx58)
Enzymes [BR:kmr01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     108243781 (dhx58)
Pattern recognition receptors [BR:kmr04054]
 Cytoplasmic pattern recognition receptors
  RIG-I-like receptors
   108243781 (dhx58)
SSDB
Motif
Pfam: RIG-I_C-RD RIG-I_C ResIII DEAD Helicase_C SWI2_SNF2 AAA_19 AAA_22 nSTAND3 PhoH Feld-I_B
Other DBs
NCBI-GeneID: 108243781
NCBI-ProteinID: XP_017284942
UniProt: A0A3Q3BN55
Position
LG12:complement(5288613..5294386)
AA seq 681 aa
MADLKLYAYQEEVVERALKRENVIIWLPTGGGKTRAAVYVAKRHLETTANAKVVVLVNKV
HLVNQHYANEFEPFLGNQYKLVKVSGDTEEKDFFGKVIQIKDVIICTAQILYNAMINKEE
AKHAELSDITLLIIDECHHTQKEDAYNKIMRCYLEKKLKGQRPLPQILGLTASPGTGGAK
ILEDAVTHILQVCANLDSAIVSTKNYIPELKKNVPRPRKTFDIVEKRHADPFGDHLKWMM
QQIHEFMDLPSDARLRECGTQEYEADVVELEKRGVKDSNRLVAQCALHLRQYNDALLIND
TLRMLDAYGSLEDFYNTKLISAMDGTDFFLVGLFQENQVELKNLTTQSCFENPKMGKLES
VLLNQFGSGVPSKGILFCKTRKSTRCLNDWVRQNRALQKAGIKAAILTGAGNGIDYMTQN
EQKDTIRNFRSDKLNLLISTSVAEEGLDIPECNLVVRYGLLTNEIAQQQASGRARARDSQ
YSVVADAGGGEVRRELINEALEELTGKAIAEVQRMSDREFRKKITTLQTEAILCKKLLEE
RQMQRNSRYAASSIQLLCRNCFTPVASGSDIKLLENAHYVNINSDFKNNYKRGANVMLQK
SFEDWEPGCIVVCNNGNCNKEWGFEMKYKECALLPNLAIKNFALETPDGRITVKKWKDVP
FMVEDFSFEKYCLDIMPGLFD
NT seq 2046 nt   +upstreamnt  +downstreamnt
atggcagatctgaaactgtatgcataccaggaggaagtggttgaaagggctcttaagaga
gaaaacgtcatcatttggctgccaacgggaggtggaaagacccgagctgctgtgtatgtg
gccaaaagacatctggagaccaccgcaaacgctaaggtggtggtcctggtcaacaaggtt
caccttgtgaaccagcattacgccaatgagttcgagccttttctgggaaaccagtataag
ctcgtgaaggtgagcggagacaccgaggagaaggatttcttcgggaaagtgattcagatc
aaagatgtcatcatctgcacagcgcagatcctttacaacgccatgattaacaaggaggaa
gcgaagcacgccgaactctcagacataactctgctgataatcgatgagtgtcaccacacc
caaaaggaggatgcctacaacaaaataatgagatgctacttggagaaaaaactgaaagga
caaagaccgttaccacagatcctgggtctcacagcctcacctgggacaggtggagcaaag
atcctggaagacgctgtgacacacatactgcaggtctgtgcgaacctggactcagctata
gtctcgactaaaaactacatccctgagctgaagaagaacgtacccagacccaggaagact
tttgacatcgtggagaaacggcacgctgatccatttggagatcatctgaagtggatgatg
caacagatccacgagttcatggaccttccctctgacgccaggctgagagagtgcggcaca
caagaatacgaggcagacgtggtggagctggagaagcgaggagtcaaagacagcaacaga
ctcgtggcgcagtgtgcgctccatctccgacagtacaacgatgctttgctcatcaacgac
acgcttcgaatgctggatgcgtatggctccctggaggacttctacaacacgaagctcatc
tcagccatggatggaacagacttcttcctggtggggcttttccaagagaatcaggtggag
ctgaagaatctaaccacacaatcctgctttgagaacccgaaaatgggcaaactggagagc
gttctgttgaatcagtttggttcaggcgtcccatcgaagggaatcctcttttgtaaaacc
cgcaaaagcacccgctgcctcaacgactgggtccgccagaatagggccttgcagaaagct
ggcatcaaggcagccatactcactggggctggcaatggcatcgattacatgacacagaat
gagcagaaggacacgattcgcaacttccgcagcgataagctcaacctcctgatctccacc
agcgtcgctgaggaaggcctcgacattcccgaatgcaacctggtggtccgttatgggctc
ctcacgaatgagatcgcccagcagcaggccagtggacgtgcccgagcgagagacagccag
tactcggttgtcgctgatgcaggaggaggcgaggtccgcagagagctcatcaacgaggcc
ctggaggagctgaccggaaaagcaatcgctgaggtccagaggatgagcgatcgagagttt
cgcaaaaagataaccaccctccaaacagaggccatcctgtgtaaaaaacttttagaggaa
cgtcagatgcagaggaacagccgctacgctgcttccagcatccagctcttgtgtagaaac
tgttttacaccagtggcctcagggagtgacattaaacttcttgaaaatgcacactacgtc
aacataaattccgactttaaaaataattacaaacgtggtgcaaatgtgatgctgcaaaaa
agttttgaggactgggagcctggatgcatagttgtttgtaataatggcaactgcaacaag
gagtgggggtttgaaatgaaatacaaagagtgcgccttgctgcccaacctagccattaaa
aacttcgccctggagactccggatggaaggataactgtgaagaagtggaaagatgttcct
ttcatggttgaggacttcagctttgaaaagtattgcctcgacatcatgcctggcctgttt
gattaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (11)   
   Pfam (11)   
All databases (25)   

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