KEGG   Kryptolebias marmoratus (mangrove rivulus): 108247347
Entry
108247347         CDS       T05608                                 
Symbol
dhx8
Name
(RefSeq) ATP-dependent RNA helicase DHX8
  KO
K12818  ATP-dependent RNA helicase DHX8/PRP22 [EC:5.6.2.6]
Organism
kmr  Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:kmr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    108247347 (dhx8)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:kmr03041]
    108247347 (dhx8)
Enzymes [BR:kmr01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     108247347 (dhx8)
Spliceosome [BR:kmr03041]
 Complex C
  Other components
   Step II factors
    108247347 (dhx8)
SSDB
Motif
Pfam: OB_NTP_bind HA2_C S1 Helicase_C HA2_N DEAD AAA_22 AAA_19 nSTAND3 Flavi_DEAD T2SSE AAA_16 TsaE PhoH ABC_tran Sigma54_activ_2
Other DBs
NCBI-GeneID: 108247347
NCBI-ProteinID: XP_017290884
UniProt: A0A3Q3A901
Position
LG17:complement(24082569..24096457)
AA seq 1216 aa
MADGGVDELSQLEYLSLVSKVCTELDNHLGINDKDLAEFVISLAEKQPSFDGFKALLLEN
GAEFTDSLIGNLLRLIQTMRPPSKASTSKASEASVKPKSEKERLKEMFPALCRANDPSPK
RILDEDDVKVAADAMKELEMFMPSVSGKDSKVIKNKSEKSKRHSRSRSRSRERDRHRDRD
RDRDRDRKRRHRSRSRSRSRSRSRDRDRHRDRDRDRGKRRDKSSRWADRSPSPRKDQDRD
SDRWKDKHVDRPPPEEPSVGDIYNGKVTSIMQFGCFVQLEGLRKRWEGLVHISELRREGR
VANVADVVSKGQRVKVKVLSFTGSKTSLSMKDVDQETGEDLNPNRRRNVGPEGGEDVSMR
NPDRPSNLNLGHAPELEQDDTLERKRLTKISDPEKWELKQMIAANVLSKEEFPDFDDETG
ILPKVDDEEDEDLEIELVEEEPPFLRGHTKQSMDMSPVKIVKNPDGSLSQAAMMQSALAK
ERRELKQAAREAEMDSIPMGLNKHWVDPLPDADGRQIAANMRGIGMMPNDIPEWKKHAFG
GNKASYGKKTQLSILEQRESLPIYKLKEQLIQAVHDNQILIVIGETGSGKTTQITQYLAE
AGYTTRGKIGCTQPRRVAAMSVAKRVSEEYGCCLGQEVGYTIRFEDCTSPETVIKYMTDG
MLLRECLIDSELGQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRTDMKLIVTSATLDAVK
FSQYFYEAPIFTIPGRTYPVEVLYTKEPETDYLDASLITVMQIHLTEPPGDILVFLTGQE
EIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAET
SLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYT
ERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTL
GALDDEGLLTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPKDK
QALADQKKAKFHQPEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQMLG
IMDRHKLDVVSCGKATVRVQKAICSGFFRNAAKKDPQEGYRTLIDQQVVYIHPSSALFNR
QPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFKVSDPTRLSKQKKQQRLEPLYNR
YEEPNAWRISRAFRRR
NT seq 3651 nt   +upstreamnt  +downstreamnt
atggcagacggaggggttgacgagctttcgcagctcgaatatttgtctttggtgtccaag
gtctgcacggagctcgacaaccatctgggaattaatgacaaagatttagccgaatttgtc
atcagtctggcagagaaacaaccgagcttcgatggattcaaggctcttttgctcgaaaat
ggagccgaattcacggattcgctcatcggtaacttgctcaggctcattcagacaatgcga
cctccttccaaagcctcaacgagtaaagcctctgaggcttcggtcaaaccaaaatccgaa
aaagaaaggttaaaggagatgtttcctgcactttgtcgagccaatgatccatcaccaaag
cgtatactggatgaagatgatgtgaaagtagcagctgatgcgatgaaagaactggagatg
tttatgcccagtgttagtgggaaagactctaaagtgatcaagaacaaatcagaaaaaagc
aaacgtcacagccggagtcgcagcagaagcagagaaagagacagacacagagacagggat
agggatcgggacagggacaggaagagacggcaccgctctcgatcacgctccaggtccagg
tctcgctccagagaccgcgatcgtcacagagaccgagacagagaccgtggaaaaaggaga
gacaagtcttcccgctgggctgatcggtcacccagcccccgaaaagaccaagacagggac
tctgacaggtggaaggacaaacatgtggaccggcctcctccagaggagccttctgttggt
gacatctacaacgggaaggtcaccagcatcatgcagtttgggtgctttgttcagctggag
gggttaagaaaacggtgggagggtttggtccacatttctgagctgcgcagggagggccgg
gtggccaacgtggccgacgttgtgagcaaaggccagagagtcaaagtcaaggtgctgtcg
ttcaccggctccaagaccagcctcagtatgaaggatgtggaccaggagacaggtgaagat
ctgaaccccaacaggaggagaaatgtaggtcctgaaggaggagaggacgtgtccatgagg
aaccccgacaggcccagcaacctgaacctgggccacgctcctgagctggagcaggacgac
actctggagcgcaagaggctcacaaaaatctctgacccggagaagtgggagctgaaacag
atgattgctgccaacgtgttgtccaaagaagaattccccgatttcgatgatgagacgggg
atccttccaaaagtcgatgatgaagaggatgaagatttggaaatcgagcttgttgaagag
gagcctccgtttctgagaggacacaccaaacaaagcatggacatgagtcccgtcaagatt
gtgaagaatccagatggctccctgtcacaggcggcgatgatgcagagcgctctggctaag
gagaggcgagagctgaagcaggctgctcgagaggcagagatggactccatccccatgggg
ctgaacaaacactgggtcgacccgctgccagacgctgatggtcggcagattgctgctaac
atgagagggatcggcatgatgcccaatgacatcccagagtggaagaaacatgcttttggg
ggcaacaaagcctcgtatgggaagaagacccagctctccatcctggagcagagggagagc
ctgcccatctacaagctgaaggagcagctcattcaggctgttcatgacaatcagattttg
atcgtcattggagagacgggttctggtaagaccacccagatcactcagtacctggcagaa
gcgggttacaccaccagagggaagatcggctgcacgcagccccgtcgtgtggctgccatg
tctgtggccaagagagtctccgaggagtacgggtgctgtctgggacaagaggtgggttat
accatccggtttgaggactgcaccagtcctgagacggtcatcaagtacatgacagacggt
atgctgctgagggagtgtttgatcgactcggagttgggccagtacgccatcatcatgttg
gacgaggcccacgagaggacgatccacaccgatgttctgtttggtctcctcaagaagacg
gtacagaaacgcacagacatgaagctgatcgtaacttctgctacgctggatgccgtgaag
ttctctcagtatttctacgaagctcccatcttcaccatcccaggcagaacgtatcccgtt
gaggttctttacaccaaagaacctgagacggattatctggacgccagcctcatcactgtc
atgcagattcatctgactgagcctccaggtgacatcctggtgtttctaacgggtcaggaa
gagatcgataccgcctgtgagatcctgtatgagagaatgaagtctcttggacccgacgtt
cctgaactcattatcctgccggtttattctgctctgcccagtgaaatgcagaccaggatt
tttgaccctgcacccccgggcagcagaaaggttgttattgctacaaacatcgcagagacc
tccctgaccatcgatgggatctattatgtggtggaccctggcttcgtcaagcaaaaagtg
tacaactctaagaccggcattgaccagctggtggtgactcccatctcacaggctcaggcc
aagcagagggcaggtcgggccggcagaactgggcctgggaagtgttacagactttacact
gaaagagcctacagggatgagatgctgaccaccaacgtgcccgagatccagaggactaac
ttggccagcaccgtgctgtctctgaaggccatgggcatcaatgacctcctgtccttcgac
ttcatggacgctcctcccatggagacgctgatcacagccatggagcagctctacactctg
ggagctctggacgatgagggcttactcacacggctcggtcgaaggatggctgagttccct
ctggagcccatgctgtgcaagatgctgatcatgtccgtccatctgggctgcagtgaagag
atgctcacgattgtgtcaatgttgtctgttcagaatgtcttctacagaccgaaggacaag
caggccctggccgaccagaagaaggcgaagttccaccagcctgagggcgatcacctcacc
ttgctggccgtgtacaactcgtggaagaacaacaagttctccaacccttggtgttacgag
aacttcatccaggctcgctccctgcgcagagctcaggacatccgcaaacaaatgctgggc
atcatggacagacacaaactggatgtggtttcttgtggcaaagcaaccgtacgagtccaa
aaggccatctgcagtggtttcttcagaaatgcagccaagaaggatcctcaggagggctac
agaaccctcatagaccagcaggtcgtttacatccacccatcaagtgctctgttcaaccgg
cagcctgagtgggtcgtgtaccacgagttggtcctgactaccaaggagtacatgcgggag
gtaaccaccatcgatcctcgctggctcgtggagttcgctcccgccttcttcaaagtgtcc
gaccccacgcgcctcagcaagcagaagaaacagcaacgcctcgaaccgctgtacaaccgc
tacgaggaacccaacgcctggagaatctcccgcgccttcaggcgccgctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (16)   
   Pfam (16)   
All databases (28)   

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