KEGG   Candidatus Kinetoplastibacterium sorsogonicusi: CKSOR_00393
Entry
CKSOR_00393       CDS       T05428                                 
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
  KO
K03177  tRNA pseudouridine55 synthase [EC:5.4.99.25]
Organism
kso  Candidatus Kinetoplastibacterium sorsogonicusi
Brite
KEGG Orthology (KO) [BR:kso00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:kso03016]
    CKSOR_00393 (truB)
Enzymes [BR:kso01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     CKSOR_00393 (truB)
Transfer RNA biogenesis [BR:kso03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    CKSOR_00393 (truB)
 Prokaryotic type
    CKSOR_00393 (truB)
SSDB
Motif
Pfam: TruB_N TruB_C_2 Pus10_C
Other DBs
NCBI-ProteinID: AWD32510
UniProt: A0A3Q8EX12
Position
complement(410341..411066)
AA seq 241 aa
MSNSLYNPINKILLLDKNINISSNNILQYVKKIVNAKKAGHTGTLDPFATGLLICCFDAA
TKISKYFLNSNKTYIATIQLGSETDTCDLTGKIIKFIDLENFVLNENLITDIISTFHGEI
EQIPPMFSAIKKSGIPLYKYARKGINFEITPRKIFIYKILILNIQQYQITIEITCSKGTY
IRALARDIGQKLGCFAHLLALRRTHIDHLSVNDAITLETLKKSLNPKEFLRNIDDILIIN
K
NT seq 726 nt   +upstreamnt  +downstreamnt
atgtctaatagtctttataatccaataaataaaatattattactagataaaaacataaat
atatctagtaataatattttacaatatgtcaaaaaaatagttaatgctaaaaaagcaggg
catactggtactttagatccgtttgctacaggattattaatttgctgttttgatgcagct
acaaaaatatcaaaatattttttaaattcaaataaaacatatatagcaactattcagctt
ggttctgaaacagatacatgtgatttaacaggcaaaataataaagtttattgatttggaa
aattttgttttaaatgaaaatttaataacagatattattagtacatttcatggagaaata
gaacaaattccaccaatgttttctgctattaagaaatctggtataccgctatacaaatat
gcaagaaagggaataaattttgaaattactcctagaaaaatatttatatataaaatatta
atattaaatattcagcaatatcaaattacaatagaaataacttgtagtaaagggacatat
atcagagcattagctagggatattggacaaaaattaggttgttttgcacatttgcttgca
ttacgtcgaactcatatagatcatttgtctgttaatgatgctataactttagaaacttta
aaaaaatccttaaatccaaaagaatttttgagaaatatcgatgatattttaattataaat
aaataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

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