KEGG   Klebsiella variicola DSM 15968: SP68_12025
Entry
SP68_12025        CDS       T03641                                 
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
  KO
K03177  tRNA pseudouridine55 synthase [EC:5.4.99.25]
Organism
kvq  Klebsiella variicola DSM 15968
Brite
KEGG Orthology (KO) [BR:kvq00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:kvq03016]
    SP68_12025
Enzymes [BR:kvq01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     SP68_12025
Transfer RNA biogenesis [BR:kvq03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    SP68_12025
 Prokaryotic type
    SP68_12025
SSDB
Motif
Pfam: TruB_N TruB-C_2 TruB_C_2
Other DBs
NCBI-ProteinID: AJE89956
UniProt: A0A087FVW0
Position
563607..564551
AA seq 314 aa
MSRPRRRGRDVHGVLLLDKPQGASSNDVLQKVKRIYNANRAGHTGALDPLATGMLPVCLG
EATKFSQYLLDSDKRYRVIAKLGQRTDTSDADGQVVEERPLTFSDEQLAAALDSFRGETQ
QVPSMYSALKYQGKKLYEYARQGIEVPREARPITVYELLFIRHEGDELELEIHCSKGTYI
RTIIDDLGEKLGCGAHVIFLRRLAVSKYPVERMVTLEQLQALVDQAAAQDIPAAQLLDPL
LMPMDSPASDYPLVAIPETSAVYFKNGNPVRQSGAPLNGLVRVMENESGKFLGMGEIDDE
GRVAPRRLVVEYPA
NT seq 945 nt   +upstreamnt  +downstreamnt
atgagtcgtcctcgtcgtcgcggccgcgacgtgcacggcgtattgttgctggacaagcct
cagggcgcttccagcaacgatgtgctgcagaaagtaaagcgtatttataacgccaaccgc
gctggccacaccggcgcgctggatccgctggcgaccggtatgctgccagtgtgtcttggc
gaagcgaccaagttttcccagtatctgctggactccgataagcgttatcgcgtgatcgcc
aaactgggccagcgcacggatacctccgatgccgacggtcaggtggtggaagagcgtccg
ctaacctttagcgacgagcagctggcggcggcgctggatagtttccgcggcgagacgcag
caggtaccgtcgatgtactcggcgctgaagtatcagggcaagaagctgtacgagtatgct
cgtcagggcattgaggtcccgcgtgaagcccggccgattacggtctatgagctgctgttt
attcgccatgaaggcgatgaactggagctggagatccactgctcgaaaggcacctacatc
cggacgattatcgatgatttaggtgaaaagctcggctgcggcgcgcacgtgattttcctg
cgtcgcctggcggtgagcaaatacccggttgagcggatggtgaccctcgagcagctgcag
gcgctggtcgatcaggcggcagcgcaggatattcctgccgcgcagctgcttgatccgctg
ctgatgccgatggacagcccggcatcggactatccgctggtggcgattccggagacctcc
gcggtttactttaaaaacggtaacccggttcgtcagtcaggcgcgccgcttaacgggctg
gtgcgggtgatggaaaacgaatccggcaagtttctcggcatgggcgaaattgacgatgaa
ggccgcgtggcgccgcgtcgtctggtggtggaatacccggcgtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

Download RDF
DBGET integrated database retrieval system