KEGG   Lingula anatina: 106151197
Entry
106151197         CDS       T04921                                 
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm4
  KO
K12623  U6 snRNA-associated Sm-like protein LSm4
Organism
lak  Lingula anatina
Pathway
lak03018  RNA degradation
lak03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:lak00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    106151197
  09123 Folding, sorting and degradation
   03018 RNA degradation
    106151197
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lak03019]
    106151197
   03041 Spliceosome [BR:lak03041]
    106151197
Messenger RNA biogenesis [BR:lak03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     106151197
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     106151197
Spliceosome [BR:lak03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    106151197
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 106151197
NCBI-ProteinID: XP_013379763
UniProt: A0A1S3H179
Position
Unknown
AA seq 140 aa
MLPLSLLRTAVNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDRFWRMPECY
IRGSTIKYLRIPDEVIDMVKEEVIQKSSRGRGDMKGRGGGQRGRGGPGRGAFGGRGGGRG
GRGGGPGGPPKNMGKGRGTK
NT seq 423 nt   +upstreamnt  +downstreamnt
atgttacctctttctctactgcgaactgctgtgaaccatcccatgctggtggagttaaaa
aatggagagacatacaatggacatttagtaagctgtgacaactggatgaatattaatctc
agagaagttatctgcacatccagggatggtgacaggttctggagaatgccagaatgttat
atcagaggcagcacaatcaaataccttaggatacctgacgaagtgatagacatggtgaag
gaggaagttatccaaaagtcgagcagaggtcgtggtgacatgaaaggtcgcggaggaggt
caaaggggtagaggaggaccaggaagaggggcatttggaggaagaggaggaggtagagga
ggaagaggaggaggaccaggaggaccaccaaagaatatgggaaaaggaagggggactaaa
taa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (40)   
   KEGG ORTHOLOGY (1)   
   RefGene (36)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (50)   

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