KEGG   Lupinus angustifolius (narrow-leaved blue lupine): 109362498
Entry
109362498         CDS       T04664                                 
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 20
  KO
K12823  ATP-dependent RNA helicase DDX5/DBP2 [EC:5.6.2.7]
Organism
lang  Lupinus angustifolius (narrow-leaved blue lupine)
Pathway
lang03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:lang00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    109362498
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:lang03041]
    109362498
   03009 Ribosome biogenesis [BR:lang03009]
    109362498
Enzymes [BR:lang01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     109362498
Spliceosome [BR:lang03041]
 Complex A
  U1 snRNP components
   U1 related factors
    109362498
 Complex B
    109362498
Ribosome biogenesis [BR:lang03009]
 Eukaryotic type
  Pre-60S particles
   Helicases
    109362498
SSDB
Motif
Pfam: DEAD Helicase_C ResIII YkuI_C
Other DBs
NCBI-GeneID: 109362498
NCBI-ProteinID: XP_019463876
UniProt: A0A4P1RTN2
Position
LG01:34767321..34773053
AA seq 632 aa
MNHFDNRYSDATSYRNRRSDLVGSMPPPAATYGRGAPAPYGGPPVSYSSGRGAPNGYGSG
PAPPVSPFIPPSGGFNIGRGGGFGDRFGNGHLGDRRDDIGRHGGGGGRGRGGFSSGHGGG
RGGNYGFRGSGRGGMGGRSYGSGGGRGGRHGGSSKGDLDNISLPRQDFRNLVPFDKNFYV
ESHSVSAMSEQEVMHYRATREITVQGNDVPRPIRTFQDANFPGYCMDVIANLGFVEPTAI
QAQGWPMALKGRDLIGIAETGSGKTLSYLLPAFVHISAQPRLSPGDGPVALVLAPTRELA
VQIQEEALKFGARTHIRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQHTNLK
RVTYLVLDEADRMLDMGFEPQIRKIVGQIRPDRQTLYWSATWPREVEKLARQFLRNPYKV
IIGSAELKANQSINQIVEIITDMEKYNRLIKLLKEMMDGSRILIFMETKKGCDQVTRQLR
VDGWAALSIHGDKNQSERDWVLAEFKSGRSPIMTATDVAARGLDVKDIKCVINYDFPTNL
EDYVHRIGRTGRAGAKGTAYTFFTHSNAKFAKELIKILQDAGQVVNPALIALARTAGSGQ
FGSGGGFRSRGRGGYGNRSGSNAVPVGFKRHW
NT seq 1899 nt   +upstreamnt  +downstreamnt
atgaaccacttcgacaacagatattccgacgccacttcttatcgtaaccgtcgctctgat
ctagttggatctatgcctcctcctgctgcaacatacggccgtggtgctcctgctccatac
ggtggtcctccggtgtcgtattcgtctggaagaggagcacctaatggttatggatccgga
cctgctcccccggtttcgccatttataccgccttcgggtggttttaatatcggtcgaggg
ggtggttttggtgatagatttggtaatggtcatttaggcgatagaagggatgacataggt
cgtcatggtggtggtggtggaagagggcgtggtggttttagctctggccatggcggtggt
agaggtgggaattatggttttaggggctccgggagaggagggatgggaggtagaagttat
ggtagtggtggtggtcgcggtggtagacatggtggttcgtctaagggtgatttggataat
atttctctcccaaggcaggattttagaaatttggtgccttttgacaagaatttttacgtt
gaaagccattcagtgagtgctatgtccgagcaagaagttatgcattaccgtgctactaga
gaaatcactgtgcaagggaatgatgtgccaagaccgattcgaacatttcaggatgcaaat
tttcctggttattgcatggatgtcattgccaatttgggttttgtcgagccaactgcaatt
caggctcagggttggcccatggctctgaagggtagagacttgattggcattgctgagact
ggatccggtaaaacattgtcatatctgcttcctgcttttgtgcatatcagtgctcaacct
cgactgtcaccaggtgatggtcctgttgcattagttttagcaccaactagagagttagct
gtacaaattcaagaagaagctctgaaatttggggcacgaacacatattagaagtacatgc
atctatggtggtgcaccaaagggccctcaaattcgcgacctgagaagaggtgttgagatt
gttattgctacacctggtcgactaatagatatgttggaagctcagcacacaaacttgaag
agagttacttaccttgtcttggatgaagctgatcgaatgttggacatgggttttgagcct
cagatacggaaaattgttggccagattcgaccagataggcagacattgtattggagtgct
acatggccaagggaggttgaaaagctggcaaggcagtttctgcgcaacccatataaggta
attattggatcagctgaactgaaagcaaatcaatctataaatcaaattgtcgaaattatt
actgatatggagaaatacaataggttgatcaaactgctgaaagaaatgatggatggtagc
cgaatcctaatatttatggaaacaaaaaagggctgtgaccaagttacaagacaattgaga
gtagatggatgggcagcgctgtccatccacggtgataaaaaccagtccgaaagggactgg
gttttggctgaatttaagagtggtagaagtccaataatgactgccactgatgttgctgca
cggggtcttgatgtgaaagacataaaatgtgtgatcaattatgattttcccaccaatctg
gaagattatgtccacagaattggccgaactggtcgtgctggggctaaaggaactgcatac
accttttttacacattccaatgccaagtttgctaaggagctgatcaagattttacaagat
gctggccaggtcgtgaatcccgcgttgattgctttagcccggacagctggttctggtcaa
tttggatccggaggaggctttcgctccagaggtcgaggaggctatggcaatcggtcagga
tcaaatgccgttccagtaggttttaagaggcattggtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (4)   
   Pfam (4)   
All databases (19)   

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