KEGG   Lysobacter antibioticus ATCC 29479: GLA29479_229
Entry
GLA29479_229      CDS       T04526                                 
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
  KO
K00962  polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
Organism
laq  Lysobacter antibioticus ATCC 29479
Pathway
laq03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:laq00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    GLA29479_229 (pnp)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:laq03019]
    GLA29479_229 (pnp)
   03016 Transfer RNA biogenesis [BR:laq03016]
    GLA29479_229 (pnp)
Enzymes [BR:laq01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.8  polyribonucleotide nucleotidyltransferase
     GLA29479_229 (pnp)
Messenger RNA biogenesis [BR:laq03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     GLA29479_229 (pnp)
Transfer RNA biogenesis [BR:laq03016]
 Prokaryotic type
  tRNA degradation factors
   GLA29479_229 (pnp)
SSDB
Motif
Pfam: RNase_PH RNase_PH_C S1 PNPase KH_1 KH_2 S1_2 KhpA-B_KH KH_5
Other DBs
NCBI-ProteinID: ALN61115
UniProt: A0A0S2FC63
Position
237087..239195
AA seq 702 aa
MAKITKTFQYGNHQVTLETGEIARQAGGAVIVKMEDTVLLVTAVAAKSAREGQDFFPLTV
DYQEKFYAGGRIPGGFFKREGRATEKETLISRLIDRPIRPLFPEDYRNEVQIIATVMSMN
PEIDGDIPALIGASAALALAGTPFQGPIGAAKVGYKNGQYLLNPTAAELAESELELVVAG
TSNAVLMVESEAKMLSEDVMLGAVMFGHREMQKVINIINELVVEAGTKPSTWEAPVKNEA
LIAALKEAVGDQLVSAFQVRDKLQRRDAIGAIKKDVLQRLAGRAEADGWSTSELSKEFGE
LEYQTMRNSVLDTKVRIDGRALDTVRPIASRVGVLPRTHGSSLFTRGETQAIVVATLGTA
RDGQIIDAVSGEYKEHFLFHYNFPPYSVGEAGRMMGPKRREIGHGRLAKRGVLAVMPTME
EFPYTIRIVSEITESNGSSSMASVCGSSLALMDAGVPIKAPVAGIAMGLVKEGDNFVVLS
DILGDEDHLGDMDFKVAGTSEGISALQMDIKIQGITEEIMKVALGQAKAGRLHILGEMAH
ALTESRTELSEYAPRLLTMKIHPDKIREVIGKGGSTIQAITKETGTQIDIQDDGTIVIAS
VNAAAAQAAKARIDQIVSDVEPGRIYEGKVAKIMDFGAFVTILPGKDGLVHVSQISNERV
EKVSDKLKEGDVVKVKVLEVDKQGRIRLSMKAVEEGEGVVAE
NT seq 2109 nt   +upstreamnt  +downstreamnt
gtggcaaaaattaccaagaccttccaatacggcaaccatcaggtgaccctggagaccggc
gaaatcgcccgtcaggccggcggcgccgtcatcgtgaagatggaggacaccgtgttgctg
gtgacggccgtcgccgccaagagcgcgcgcgaaggccaggacttcttcccgctcaccgtg
gattaccaagagaagttctacgccggcggtcgcatcccgggcggcttcttcaagcgcgaa
ggccgtgcgaccgagaaggaaacgctgatctcgcgcctgatcgaccgtccgatccgtccg
ctgttcccggaggactaccgtaacgaagtccagatcatcgccacggtcatgtcgatgaat
ccggaaatcgacggcgacatcccggccctgatcggtgcctcggccgcgctcgcgctggcc
ggcaccccgttccagggcccgatcggcgcggccaaggtcggttacaagaacggccagtac
ctgctcaacccgaccgccgccgagctggccgaatccgagctcgagctcgtcgtcgccggt
acctcgaacgcggtgctgatggtcgaatccgaagccaagatgctgtccgaggacgtcatg
ctcggcgcggtgatgttcggccatcgcgaaatgcagaaggtcatcaacatcatcaacgag
ctcgtcgtcgaagccggcaccaagccgtcgacgtgggaagctccggtcaagaacgaagcg
ctgatcgccgcgcttaaggaagccgtgggcgaccagctcgtttcggcgttccaggtgcgc
gacaagctgcagcgtcgcgacgccatcggcgcgatcaagaaggacgtgctgcagcgcctg
gccggccgcgccgaagccgacggctggagcacctcggagctgtcgaaggaattcggcgag
ctcgagtaccagaccatgcgcaactcggtgctcgacaccaaggtccgcatcgacggccgc
gccctcgacaccgtgcgcccgatcgcttcgcgcgtcggcgtgctgccgcgtacccacggc
tcctcgctgttcacccgcggcgagacccaggccatcgtggtcgccaccctcggcaccgcg
cgcgacggtcagatcatcgacgccgtctcgggcgagtacaaggaacacttcctgttccat
tacaacttcccgccttactcggtcggcgaagccggccgcatgatgggcccgaagcgtcgc
gaaatcggccacggccgtctcgccaagcgcggcgtgctcgccgtgatgccgacgatggaa
gaattcccgtacaccatccgtatcgtctcggaaatcaccgagtcgaacggttcgtcctcg
atggcttcggtctgcggcagctcgctggcgctgatggacgccggcgtgccgatcaaggcg
ccggtcgccggcatcgcgatgggcctggtcaaggaaggcgacaacttcgtcgtcctgtcg
gacatcctgggcgatgaagatcacctcggcgacatggacttcaaggtggccggcacttcc
gagggcatctcggcgctgcagatggacatcaagatccagggcatcaccgaagagatcatg
aaggtcgcgctgggccaggcgaaggccggccgtctgcacatcctcggcgagatggcgcat
gccctcaccgagtcgcgcaccgagctgtccgagtacgcgccgcgtctgctgaccatgaag
atccacccggacaagatccgcgaagtgatcggcaagggcggctcgaccatccaggcgatc
accaaggaaaccggcacccagatcgacatccaggacgacggcaccatcgtcatcgcttcg
gtcaacgccgccgccgcgcaggccgcgaaggcgcgcatcgaccagatcgtgtccgacgtc
gagccgggccgcatctacgaaggcaaggtcgccaagatcatggacttcggcgccttcgtg
acgatcctgccgggcaaggacggtctggtccacgtctcgcagatctccaacgagcgcgtc
gagaaggtcagcgacaagctcaaggaaggcgacgtggtcaaggtcaaggtgctggaagtc
gacaagcagggccgtatccgcctgtcgatgaaggccgtcgaagaaggcgagggcgtcgtc
gccgagtaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (20)   

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